Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02708 ATGGATCCAGAAACCCTCTCCGCCACTTTGTTCAAATGGGAGCCTCGAGAAATGGTGGGAGGCGGCAGCGGCGCACCCCTCCCAGCACCACTGCCCCCCTACTCGCTGCGGCCGAGGGAGTTGGGATTAGGAGGCCTGGAGGATTTGTTTCAGGCTTACGGAATCAGGTACTACACTGCCGCTAAAATTGCAGAACTCGGATTCACCGTCAGCACCCTTGTGGACATGAAAGACGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGACCTTCTAGTGGGTGAAAGGTACGGAATTAAGGCTGCTGTACGAGCCGAACGCAGACGTCTAGATGACGAGATCGAATCCTCCAGACGCCGTCACCTCTTGTCCAACGACACCACTACTAACGTCGTTCTCGATGCCCTCTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAAGAGGCGGTGGGGAGCGGAGGAGGAGGAGGAGCGTGGGAGGCAGTTGCAGCCGCTGAGATGAGGAAGAAGCAGCGGAGGAGAAATGGATCAAAAAAGAAGCAGGTGATAGCGATGGAGGAGGATAACGATGAAAACGAGGGAGCTGGGGACGAGGAGGAGAATATGGAAGTCAGCGAGAGACAGCGGGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGAGGAAAGAAAAACGGTCTCGACTATCTTTTTCACCTCTATGAACAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAAAGAGGAGAAAAATGCCCCACTAAGGTGACGAACCAGGTGTTTAGATATGCAAAGAAGGCGGGTGCAAGTTACATAAATAAGCCGAAAATGAGACACTACGTGCATTGCTATGCACTGCATTGTCTGGACGAGGAGGCGTCGAACGCATTGAGGAGCGTTTTCAAAGAGAGAGGCGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTGACCATAGCAGGTACCCAAGGTTGGGACATCGATGCCATTTTCAATGCACATCCACGCCTTGCCATCTGGTATGTGCCTACCAAACTCCGCCAACTCTGCCACGCAGAGCGCAATGGTTCGACGGCCTCCACCTCCACTGCCTCCGCTCACTTGCCTTTTTAA 1161 53.4 MDPETLSATLFKWEPREMVGGGSGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELEDMMNSLSHIFRWDLLVGERYGIKAAVRAERRRLDDEIESSRRRHLLSNDTTTNVVLDALSQEGLSEEPVQQEKEAVGSGGGGGAWEAVAAAEMRKKQRRRNGSKKKQVIAMEEDNDENEGAGDEEENMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRSVFKERGENVGAWRQACYKPLVTIAGTQGWDIDAIFNAHPRLAIWYVPTKLRQLCHAERNGSTASTSTASAHLPF* 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29911665 29913472 - Chy2G049750.1 Chy02g02708 222156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02708 386 MobiDBLite consensus disorder prediction 143 216 - -
Chy02g02708 386 PANTHER PROTEIN LEAFY 1 386 - -
Chy02g02708 386 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 211 374 IPR035209 GO:0003677
Chy02g02708 386 PANTHER PROTEIN LEAFY 1 386 IPR002910 GO:0003677|GO:0006355
Chy02g02708 386 Pfam Floricaula / Leafy protein SAM domain 43 118 IPR035079 -
Chy02g02708 386 Gene3D Protein LEAFY 212 380 IPR038276 -
Chy02g02708 386 Coils Coil 105 125 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17634 PF17538 C_LFY_FLO 1.00E-106 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02708 - - csv:101205888 702.975