Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00103 ATGGGTCGGTGGAATGACAAACTTGTTGCCTTTATCAACAATAGATGGTTGGTTTTTGTTGCTGCAATATGGCTTCAATCTTGGGCTGGAATTGGATATCTTTTTGGAAGTATATCGCCGATAATCAAAACCAATTTGAGTTACAATCAGAGACAAATTTCTCGTCTTGGTGTCGCTAAGGATCTTGGCGATAGCGTTGGCTTTTTGGCTGCAACGTTAACGGAGATGTTGCCCTTTTGGGGAAGTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGGTTTGGCTCATCGTCACTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGCTCTTGTATTTATTGGAACGAATGGGGAGACGTACTTCAATACAGTTTCTTTGGTTTCTTGTGTACAAAACTTCCCGAAAAGCAGAGGCCCTGTGGTCGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCTATTTTGACTCAGACATATGCAATCTTCCATTCTCCTGAATCAGCCAATCTTATATTCATGGTTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTTATCAGACCTGTTGCCGGTCATCGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCATATTTGATGGGAGTCATGCTTATTGAGGATCTTGTTACCTTGAGCCCCATTGTGATAACCATATTTACTGTGGTTATGTTTGTCATCCTTCTTACGCCCTTTTTTATTCCCGTGTCATTGACTTTTAGCTCGGAGGCAACAACATATGCTGAGCAAGAGGCTCTCCTGCCACCGTCTGAGAAAGAGGAACCTGCTAGAACTGAGCCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGATGAAAAATCCGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAGTTGCAAGCAAAACTATTGCAAGCAGCCGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTTCTTGGTTCTGGAACTGGATTGACCGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTACGATAATACACATATTTTTGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTCGGTGGTGGATATCTATCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATAGCAATGACGATTGCGCAAGTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCCGGGGCAATGTACATTGGCACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCCATTGTACCTGCTACTGCCTCCGAATTGTTTGGGTTGAAAAAGTTTGGCGCTTTATACAACTTCATCACTCTCTCAACTCCTATGGGATCTTTGGTATTTTCTGGCTTAATCGCGAGCGGTATATATGATAGTGAAGCCGAGAAGCAAGCTCGTAATCATCTCACACAGTTCCAGAGCTCCTCATCATTTTGGTTCACCAGACTTTACACCGAGGGACCGCACAAGTGCGAGGGCGCCATATGCTTCTTTTTAACTTGTATGATAATGGCTGGATTCTGCGCGATTGCAGCGATATTAAGTTTAATTTTGGTGCACCGGACAAAGGGTGTTTACCACAACCTCTATGGAAAATCTCGTACATCAACACTTTCATAG 1791 45.06 MGRWNDKLVAFINNRWLVFVAAIWLQSWAGIGYLFGSISPIIKTNLSYNQRQISRLGVAKDLGDSVGFLAATLTEMLPFWGSLLVGAIHNFVGYGWVWLIVTGRAPVLPLWAMCALVFIGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQTYAIFHSPESANLIFMVAVGPALVAIGVMFFIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLIEDLVTLSPIVITIFTVVMFVILLTPFFIPVSLTFSSEATTYAEQEALLPPSEKEEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQVLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPMGSLVFSGLIASGIYDSEAEKQARNHLTQFQSSSSFWFTRLYTEGPHKCEGAICFFLTCMIMAGFCAIAAILSLILVHRTKGVYHNLYGKSRTSTLS* 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1022800 1025388 + Chy3G050830.1 Chy03g00103 222264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00103 596 CDD MFS_Mch1p_like 15 569 - -
Chy03g00103 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 592 - -
Chy03g00103 596 Pfam Nodulin-like 15 262 IPR010658 -
Chy03g00103 596 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 4 592 - -
Chy03g00103 596 SUPERFAMILY MFS general substrate transporter 212 582 IPR036259 -
Chy03g00103 596 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
Chy03g00103 596 Gene3D MFS general substrate transporter like domains 364 589 IPR036259 -
Chy03g00103 596 Coils Coil 316 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00103 Chy-Chr3:1022800 Chy07g01584 Chy-Chr7:20019336 1.11E-108 dispersed
Chy03g00103 Chy-Chr3:1022800 Chy11g00271 Chy-Chr11:2518261 1.73E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00103 - - csv:101211655 1152.12