Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00104 ATGGGATTATGGTTTCGTTGGAAAGGTTTGGTTTTAGCAGTGGTTGTTGCGTGGACGGCGACGGGGACGGTGAAGAGAGGGGAGGCGCAATTAGTTGAAAATTTCTATGGCTCAAATTGCCCAAACTTAGAGCAAATCGTTACACAATCTGTCCAAACCAAATTTGCTCAAACTTTTGTTACAATTCCCGCAACTTTGAGACTCTTCTTCCATGATTGCTTTGTCGAGTCTAAAATAGACATTGATATATTATTATCGAGATCATATATGGAGATTGGTGTGGTTCATAATCAAGGATGCGATGCTTCAGTGTTGATAGCTTCTCCAAATGGAGATGCAGAGAAAGATGCAAAAGACAATCTTTCATTAGCGGGAGATGGGTTTGACACCGTTGTTAAAGCAAAACAAGCTGTTGAAAATGTTTGTCCTGGTCTCGTTTCTTGTGCTGACATCTTGGCTCTTGCAACTAGAGATGTTGTTAACTTGGCAGGAGGTCCACAATATAGTGTGGAACTTGGACGTAGAGATGGGCTTATTTCTCAAGCATCTCGAGTGGCAGGAAACCTACCAGAACCATTCTTCGATCTGAACCAACTAACAAACATGTTTGCCGCCCACAACCTAACCCTAATCGATATGATCGCCCTTTCTGGAGCCCACACCCTGGGATTCTCCCACTGTGACCGTTTCGCGAATCGCCTTTACTCATTTTCACCTTCGTCTCCAACGGACCCATCGTTGGACCCCGAGTACGCACGACAGCTAATGGATGCTTGTCCGCAGAATGTGGATCCCAGTGTGGCCATCAACATGGACCCTATAACTCCTCAGACCTTTGACAACGTTTACTATCAAAACCTCATCTCTGGCAAAGGCTTATTCACTTCCGATCAGATTCTGTTTACCGAGTCTGAATCACAACCAACAGTTAGTAGTTTTGCCACCAATGGAGCAGAGTTTAATGCAGCGTTTATCACAGCCATGACCAAGTTAGGTCGAGTTGGGGTTAAGATTGGTAATGATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 1062 44.35 MGLWFRWKGLVLAVVVAWTATGTVKRGEAQLVENFYGSNCPNLEQIVTQSVQTKFAQTFVTIPATLRLFFHDCFVESKIDIDILLSRSYMEIGVVHNQGCDASVLIASPNGDAEKDAKDNLSLAGDGFDTVVKAKQAVENVCPGLVSCADILALATRDVVNLAGGPQYSVELGRRDGLISQASRVAGNLPEPFFDLNQLTNMFAAHNLTLIDMIALSGAHTLGFSHCDRFANRLYSFSPSSPTDPSLDPEYARQLMDACPQNVDPSVAINMDPITPQTFDNVYYQNLISGKGLFTSDQILFTESESQPTVSSFATNGAEFNAAFITAMTKLGRVGVKIGNDGEIRRDCTAFNS* 354
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 1028875 1030859 - Chy3G050840.1 Chy03g00104 222265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00104 353 PANTHER PEROXIDASE 23 86 - -
Chy03g00104 353 ProSiteProfiles Plant heme peroxidase family profile. 30 352 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 270 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 286 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 126 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Plant peroxidase signature 326 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 Gene3D - 34 352 - -
Chy03g00104 353 Pfam Peroxidase 49 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PANTHER - 98 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Chy03g00104 353 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PRINTS Haem peroxidase superfamily signature 272 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 CDD secretory_peroxidase 30 351 IPR033905 GO:0004601|GO:0042744
Chy03g00104 353 SUPERFAMILY Heme-dependent peroxidases 30 352 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 PANTHER - 23 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00104 353 Gene3D Peroxidase, domain 2 190 331 - -
Chy03g00104 353 PANTHER PEROXIDASE 98 353 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00104 Chy-Chr3:1028875 Chy03g00106 Chy-Chr3:1038024 8.07E-157 dispersed
Chy03g00104 Chy-Chr3:1028875 Chy03g00105 Chy-Chr3:1034316 9.97E-159 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00104 K00430 - csv:101213580 621.698