Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00105 ATGGGGATTTTTGTGGAAATAGGTGAAGGGCAGTTGGTGAAAAACTTTTATAAGTCCACTTGTCCAAACGTGGAACAAATAGTGACACAAGCCGTTCGAAACAAGTTCTCTCAAACGATCATCACCATCCCTGCTACTCTCCGTCTCTTTTTCCACGACTGCTTTGTTGAGGGATGCGATGCTTCCGTCATGATTTCATCGCCAACCGGAGACGCCGAGAAGGACGCTCAAGATAACCTTTCCCTCGCCGGAGATGGCTTCGACACTGTCGTCAAGGCTAAGCAAGCCGTCGAAGCCGCATGCCCCGGCCGAGTCTCTTGCGCCGACATTCTGGCTCTCGCCGCCAGAGACGCCGTCGTCCTCGCTGGAGGCCCAAATTTCAACGTCGAATTAGGACGTCGCGACGGTTTAATCTCGAAAGCCTCACGCGTCGACGGCAATTTACCATCCCCAAATTTCGACCTAAACTCACTGACTTCCATGTTCGCGAAACACGGGCTGTCCCAAACCGACATGATCGCCCTCTCGGGCGCCCACACCATCGGCGCCTCCCACTGCAACCGGTTCTCGGATCGACTCTTCTCCGCTTCCGGTGTAGATCCGTCGCTAAACCCTGGTTACGCAGAAGAGCTGAAGCAAGCGTGCCCTCGGAATGTAGATCCAGGGGTGGTGGTGAAGCTGGATCCGACTACTCCGGACAGTTTCGACAATGCATATTACAGAAATCTGGTGGAGGGAAAAGGATTGTTTAGATCAGATGAGGTTCTGTTCACGAATTCGGCGTCGAAGGGGAGGGTGGTGGGATTTGCGAATAACAAGGGGAAGTTTAATGGGGCGTTTGTGAAGGCGATGAGGAAGCTTGGGAGAGTGGGGGTTAAGACGGGGAAAGCTGGACAGATAAGAAGAGATTGTACTGCTTTCAATTGA 927 52.75 MGIFVEIGEGQLVKNFYKSTCPNVEQIVTQAVRNKFSQTIITIPATLRLFFHDCFVEGCDASVMISSPTGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNSLTSMFAKHGLSQTDMIALSGAHTIGASHCNRFSDRLFSASGVDPSLNPGYAEELKQACPRNVDPGVVVKLDPTTPDSFDNAYYRNLVEGKGLFRSDEVLFTNSASKGRVVGFANNKGKFNGAFVKAMRKLGRVGVKTGKAGQIRRDCTAFN* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1034316 1036073 - Chy3G050850.1 Chy03g00105 222266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00105 308 Pfam Peroxidase 29 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 Gene3D - 15 308 - -
Chy03g00105 308 CDD secretory_peroxidase 11 307 IPR033905 GO:0004601|GO:0042744
Chy03g00105 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 171 181 IPR019793 -
Chy03g00105 308 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PANTHER PEROXIDASE 4 308 - -
Chy03g00105 308 ProSiteProfiles Plant heme peroxidase family profile. 11 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 SUPERFAMILY Heme-dependent peroxidases 11 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 Gene3D Peroxidase, domain 2 149 287 - -
Chy03g00105 308 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00105 308 PANTHER - 4 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00105 Chy-Chr3:1034316 Chy04g00298 Chy-Chr4:2695692 5.37E-131 dispersed
Chy12g01063 Chy-Chr12:15779580 Chy03g00105 Chy-Chr3:1034316 1.11E-63 dispersed
Chy03g00104 Chy-Chr3:1028875 Chy03g00105 Chy-Chr3:1034316 9.97E-159 tandem
Chy03g00105 Chy-Chr3:1034316 Chy03g00106 Chy-Chr3:1038024 1.58E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00105 K00430 - csv:101213343 596.275