Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00106 ATGGCAGCCATGGCAATGCGAGTGGCGGTGTTGTCTTTGGCTCTGGTTTGCATGCTCATTGGCGTTGCCCATGCGCAGCTCTCCTTCAACTTCTATAATTCCTCCTGCCCAAATGTCGAACAAATCGTTCGCCAAGCTGTAAGCTTAAAGATTAACCAAACATTTGTTACCATTCCAGCAACTCTTAGGCTTTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCTGTTATGATCGCGTCCGCAAGTGGTGACGCTGAAAAAGACTCAGAGGACAACTTGTCGTTGGCAGGAGATGGGTTTGATACTGTGATTAAGGCGAAGCAGGCTGTGGAAGCTCAATGTCCTGGAAAAGTATCGTGTGCAGATATTTTGGCCATTGCTGCAAGGGATGTCGTGGTTTTGGCGGGAGGACAAAATTTTGCAGTGGAATTAGGACGACGAGATGGGCTAATCTCAAAAGCCTCATTGGTAGCCGGAAACTTGCCAGGACCAAACTTCAACCTAAGCCAACTAAACACAATGTTCACCAAAAACAATCTAACCCAAACCAACATGATCGCATTATCAGGAGCCCACACAGTTGGGTTCTCACACTGCAGCCGTTTCGCGAACCGTCTCTACAACTTCTCAGCCACTTCCAAAGTAGACCCTTCTCTGGATCCGAAGTACGCCAAGCAGCTCATGGGCGCATGCCCACAAGACGTGGACCCTAGAATCGCTGTGGACATGGACCCATTAACCCCAAGGAAAATGGACAATGTGTATTACCAAAATCTTGTGAACCATAAGGGGCTTTTCACGTCGGATCAAGTGCTTTATATGGACCCATTGTCGCAAGCCACTGTGAGTGGGTTTGCGAATGATCGTAGTGGGTTCAATAAAGCGTTTGGTGAGGCTATGGTTCGGCTTGGGAGAGTGGGGGTTAAGACGGGGACTGTGGGTGAGATTAGAAAAGATTGTACTACCTTTAATTAA 981 47.71 MAAMAMRVAVLSLALVCMLIGVAHAQLSFNFYNSSCPNVEQIVRQAVSLKINQTFVTIPATLRLFFHDCFVQGCDASVMIASASGDAEKDSEDNLSLAGDGFDTVIKAKQAVEAQCPGKVSCADILAIAARDVVVLAGGQNFAVELGRRDGLISKASLVAGNLPGPNFNLSQLNTMFTKNNLTQTNMIALSGAHTVGFSHCSRFANRLYNFSATSKVDPSLDPKYAKQLMGACPQDVDPRIAVDMDPLTPRKMDNVYYQNLVNHKGLFTSDQVLYMDPLSQATVSGFANDRSGFNKAFGEAMVRLGRVGVKTGTVGEIRKDCTTFN* 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1038024 1041036 - Chy3G050860.1 Chy03g00106 222267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00106 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 Gene3D - 30 326 - -
Chy03g00106 326 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PANTHER PEROXIDASE 6 326 - -
Chy03g00106 326 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Chy03g00106 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 Gene3D Peroxidase, domain 2 164 305 - -
Chy03g00106 326 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00106 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00104 Chy-Chr3:1028875 Chy03g00106 Chy-Chr3:1038024 8.07E-157 dispersed
Chy03g00106 Chy-Chr3:1038024 Chy11g00234 Chy-Chr11:2187809 7.29E-147 dispersed
Chy03g00105 Chy-Chr3:1034316 Chy03g00106 Chy-Chr3:1038024 1.58E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00106 K00430 - csv:101213098 627.091