Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00107 ATGGAAGTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTTTTTGCCTCTGGAAATGTCGAGCGCGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGCTACAGCTGCATAATATGGCAGTTGATGCTCGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCAAGGCATACTGCCTCTTGTTCAGTTTGCCCTAGAGTTTACCCGACATCACGCCTACTTAGTTTACATGTCTCTGAGGCGCACGACTCGTTCTTTCAAGCAAAAGTCGCGCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTATAAAATCAGACACCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAAACCTATCGTAAACAAGCCATTCAAGGAAGGGAAGAAACCTCCAAAATGGAAGTCGAGAATGAAATTATGGATGGCCTCATTTCAGGAGTATCTAAACTAAGTACTTCGGACTCAACTCCTTCGTCAATCAGCTTTGGCCGGAGGCACACTCGAGGGTTAACATTTGTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCATCAACAGCTGGAACAAAGAGATGA 750 43.33 MEVESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDARSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKIRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQAIQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVSDSSTAGTKR* 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1043032 1044702 + Chy3G050870.1 Chy03g00107 222268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00107 249 PANTHER UNCHARACTERIZED 4 238 IPR039258 -
Chy03g00107 249 ProSitePatterns Zinc finger C2H2 type domain signature. 92 113 IPR013087 -
Chy03g00107 249 PANTHER ZINC FINGER PROTEIN 511 4 238 - -
Chy03g00107 249 ProSitePatterns Zinc finger C2H2 type domain signature. 130 153 IPR013087 -
Chy03g00107 249 SMART c2h2final6 90 113 IPR013087 -
Chy03g00107 249 SMART c2h2final6 63 88 IPR013087 -
Chy03g00107 249 SMART c2h2final6 128 153 IPR013087 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17641 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00107 - - csv:101212859 481.1