Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00145 ATGGCATCCATTTCAAAACGGCTACTCCTCTTCGTGGCGGCGCTACTCGCCACCGCAGAAATCGCTACCTCCATCACCCGATGTCCGGACTGCGGCGGGGCTGCCGTCCCCTATCCTCTAAGTACAAGCCCCACTTGTGGTGACCAATTGTACAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGACACGCTAAACAACACGTACCCGATCATCTCAATCAACCCGTTGACCCAACGCCTGGTGATCCGCCCCTCAAATTTCATCCCCAACACGTGCGTGACAGCGGATATCGCCCACGAAGGAATTCAACTGAACAGTACTTTACCGTTCAACGTGACGAGCGGGAACACGATCCTCTACTTCAACTGTACGGATTTGCTGCTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACATCAAGGGATCGAGAGGAGAAGCGACGACGTGCGAGATGGCGCCGCTGTGCTGCACGTTTCGGGCGGGTGGATCGTCGAATTCGTACATGATTAGGGTGAGGGAATCAGGGTGTAGAGCGTACACGAGCTTTGTGAATTTGGACCCGAGTTTGGGAGTGGGTCAATGGCCGGAACCGGGTTTAGAGTTGCAGTGGCTTTTGCCGAGGGAACCGGTTTGTAATACGGAGGCTGATTGTGACGGGAACGCGGTTTGTGGTGTTGATCCTAACGGGACGGGGTTGAGGCGTTGTGTTTGTAATTCAGGGTTTGTGTGGGACCCTGTTGCTGGAATCTGTTCTCAAAACACGTGTCATGATCCTGATGGGTGTAATCATCACCGAACTGCACTGATTGCCGGCGTTGTATCCGGCGTGGGTGCGGCGGTGGTGGTCGCAATAATAGCCATCCTATTTTACAATCGGCATAGAAGAGCAAAAGAAGCTCAAGATCGTTTAAAAAAGGAGCGTGAAGCAATTTTAAATTCGGGCAGTGGAGGAGGAAGAGCGGCAAAGATCTTCACCGGGAAAGAGATCAAGAGGGCCACCCACAACTTCTCCGCAGACCGCCTTCTGGGTGTGGGTGGCTACGGGGAGGTCTACAAAGGCGTTCTTGGGGACGGTACCGCCGTGGCCGTGAAGTGCGCAAAGCTCGGAAACGCAAAGGGGACGGACCAAGTCCTGAATGAGGTCCGAATCCTCTGCCAAGTTAATCACCGGGGTCTTGTTCGGCTTCTTGGTTGCTGCGTCGAATTAGAACAGCCAATTTTGGTGTACGAGTATATCCCCAACGGCACTCTTCTCGACTATTTACAAGGTAAGAATGACACAAAGCCATTATCATGGGAGGAACGGCTCCGAATAGCTCAAGGCACAGCGGAGGGATTAGCATATCTTCATTTCTCAGCACTTCCACCCATCTACCACCGAGACGTGAAATCCAGCAACATCCTATTAGACCATAAGCTAATCCCCAAAGTTTCCGATTTCGGCCTCTCCCGATTGGCTGAAACAGATCTAAGCCATATCTCGACTTGCGCTCAAGGAACTCTGGGCTATCTAGACCCTGAGTACTATCGAAACTACCAATTGACGGACAAAAGCGATGTGTATAGCTTTGGAGTAGTTTTACTTGAATTGTTGACGTCGGAGAAGGCCATTGACTTCAGTCGGGATGCTGACGACGTGAATTTGGCGGTTTACGTGCAGCGATTGGTGGAGGAAGAGAGATTGGTAGATGGGATCGATCCGTGGTTGAAGAAAGGAGCGAGTGATGTGGAGGTTGATACAATGAAGGCCTTGGGGTTTCTTGCAGTTGGGTGTTTGGAACAGAGAAGACAGAATCGGCCTTCTATGAAAGAAGTGGTGGAGGAGATTCAATACATCATTAGTATTGCCATTGCTAAGCCTTGA 1881 51.57 MASISKRLLLFVAALLATAEIATSITRCPDCGGAAVPYPLSTSPTCGDQLYKIRCDAGSLKFDTLNNTYPIISINPLTQRLVIRPSNFIPNTCVTADIAHEGIQLNSTLPFNVTSGNTILYFNCTDLLLRSPLNCSSTSLCHSYIKGSRGEATTCEMAPLCCTFRAGGSSNSYMIRVRESGCRAYTSFVNLDPSLGVGQWPEPGLELQWLLPREPVCNTEADCDGNAVCGVDPNGTGLRRCVCNSGFVWDPVAGICSQNTCHDPDGCNHHRTALIAGVVSGVGAAVVVAIIAILFYNRHRRAKEAQDRLKKEREAILNSGSGGGRAAKIFTGKEIKRATHNFSADRLLGVGGYGEVYKGVLGDGTAVAVKCAKLGNAKGTDQVLNEVRILCQVNHRGLVRLLGCCVELEQPILVYEYIPNGTLLDYLQGKNDTKPLSWEERLRIAQGTAEGLAYLHFSALPPIYHRDVKSSNILLDHKLIPKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSEKAIDFSRDADDVNLAVYVQRLVEEERLVDGIDPWLKKGASDVEVDTMKALGFLAVGCLEQRRQNRPSMKEVVEEIQYIISIAIAKP* 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1318082 1321618 + Chy3G051250.1 Chy03g00145 222306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00145 626 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Chy03g00145 626 Gene3D Phosphorylase Kinase; domain 1 319 417 - -
Chy03g00145 626 CDD STKc_IRAK 348 616 - -
Chy03g00145 626 Pfam Protein tyrosine and serine/threonine kinase 345 614 IPR001245 GO:0004672|GO:0006468
Chy03g00145 626 PANTHER OS05G0318100 PROTEIN 17 623 - -
Chy03g00145 626 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 623 IPR045274 GO:0007166
Chy03g00145 626 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00145 626 Gene3D Transferase(Phosphotransferase) domain 1 418 623 - -
Chy03g00145 626 SUPERFAMILY Protein kinase-like (PK-like) 327 614 IPR011009 -
Chy03g00145 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Chy03g00145 626 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00145 Chy-Chr3:1318082 Chy07g00718 Chy-Chr7:7215878 2.15E-81 dispersed
Chy04g01987 Chy-Chr4:25704524 Chy03g00145 Chy-Chr3:1318082 7.39E-62 dispersed
Chy05g01062 Chy-Chr5:15139531 Chy03g00145 Chy-Chr3:1318082 7.25E-41 dispersed
Chy03g00145 Chy-Chr3:1318082 Chy02g01226 Chy-Chr2:8870818 3.09E-74 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71111 PF07714 PK_Tyr_Ser-Thr 3.50E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00145 - - csv:101220186 1206.05