Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00186 ATGCACTTTGAACCCTCTCGAACTCTATTGAAGTATATTAGATTAGTCTTCAATCTGTGGCTTGTCTCAGTTGTGTTCCAAAAGGCTGTTAATGGAGTTGGAATTGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTTTGGCTTGCACAAGAGCTGCATCTGAGACAAGTGGCAGTTATGGCCTTACCTTCCTGTTTTAACCAAAGAACACGACTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGGTCTAGATGTCAATTCTTCTATGAATTTGGATGCAAGATTGCACCTTTGGTTGGCGATAGAACAATCGGTTCTTGGCTTCTATCAACGTTCAAGAGTAGGTACAAGGAAGTTCTTACGAAGGCTCACAGTGCAGTATTTGCTGCAAGTTCAAAATATTTGGCACTTCTGGCAAAAGAAGAAACCAAAATGTATGAAGCAGCTCAATCCTCCATGACAGCCTTCAAGAAATGGAGAATGGGTGGACCTAGATTCCAGAGAGCATCCTTTCTAAGCAGGAAGAGGAAGTCAACTGAGTAG 573 42.23 MHFEPSRTLLKYIRLVFNLWLVSVVFQKAVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTFKSRYKEVLTKAHSAVFAASSKYLALLAKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFLSRKRKSTE* 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1706954 1711300 + Chy3G051660.1 Chy03g00186 222347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00186 190 PANTHER UNCHARACTERIZED 22 189 IPR010492 -
Chy03g00186 190 SUPERFAMILY PriA/YqbF domain 21 71 - -
Chy03g00186 190 CDD GINS_A_psf3 70 172 - -
Chy03g00186 190 SUPERFAMILY GINS helical bundle-like 70 171 IPR036224 -
Chy03g00186 190 Pfam GINS complex protein 50 152 IPR021151 -
Chy03g00186 190 Gene3D - 20 171 IPR038437 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00186 K10734 - csv:101203869 329.717