Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00199 ATGGTCGAGAAAATGGGTCACAGTGATCAATATTCTGATGCGATTTCTTTACCTACAAATTCAATCAGGAAGAGGAAGTCACGGAGTAGACGAGATCGATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAAGCATATAATGAATGTTTCGATTCTAGTAATGATGGTGGCAAGCTTATCCGTAAAGCTCCAGCAAAAGGGTCTAAGAAAGGATGTATGAAAGGCAAAGGAGGACCCTTAAATTCACATTGCAATTACAGAGGTGTGAGACAGAGGACTTGGGGCAAATGGGTTGCTGAGATTCGTGAACCCAATAGAGGGAGTAGGCTTTGGCTTGGTACTTTCCCTACTGCCATTGAAGCCGCTCTTGCCTACGACGAGGCTGCAAGGACGATGTACGGTCAGACTGCTCGTTTAAACCTTCCCAACATTAAAAATAGAGGGCAGCTACAGGGGATTCTCTTGGAGGAATACTTGGGGCTGCGTAACTCGGATTCTTCAACCAATACTTCTGCATGTTCAGAATCGACTACTACAACTTCCAACCAATCTGAGGTCTGTGTTTCTGAGGAGTTCCCAATGAGGCCACAACTTGTTCCCTTAAACGTTAAGACTGAAGATGGAGAAGGTGAATCGAAGACCGGGGATCATGGTGATGAGACTGCAACACCGATGTGCTTAGAGAATCAAGTGAAACATGAGGATCGTAATGATCAGCTAGTTGCATTAGAGTCTGAGTTTCCTTGTCTGGATCAGTTGGAGAACTTTCAAATGGATGAAATGTTCGAGCCAAGGACGGGGACTCAGGCTGGCCATATGGTGATGCCAGTGAGCTTAGAGAAGCAAGTGAAGGATGAAGATCTGGATGCTGTATATCGTGAACGGAGTGATGATCAAGCAGTCCTATCAGAAGCTGGGGTTCCAAGTCTATATGATTTACAGAACTTTCAAATGGATGAAATGTTTGACGTGGAAGAGCTTCTAAGTCTCATATATAGTGATTCCTTGCATGATCCAACAAACATCTTGAAGGGCAATGCAGATGGTTATACGAACATGGCGCCTTCTCAAATTGGCAGTGTTGGGTCTGAGAAGCCACCAAATAGGTCATACCAATTCCAAAATCCCGACACTAAGCTTCTCGGAAGTCTCCAACAGATGGAGCGAACTCCGGCCGATATTGACTACGGATTTGATTTCCTGAAGCAGGGAAGGGAGGAGGATCTGAATGCAGCAGCAGATGATTGTGTTAGATACCTGAACGAAATTGGTGATTTAGGATTTTGA 1287 44.99 MVEKMGHSDQYSDAISLPTNSIRKRKSRSRRDRSTVAETLAKWKAYNECFDSSNDGGKLIRKAPAKGSKKGCMKGKGGPLNSHCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIEAALAYDEAARTMYGQTARLNLPNIKNRGQLQGILLEEYLGLRNSDSSTNTSACSESTTTTSNQSEVCVSEEFPMRPQLVPLNVKTEDGEGESKTGDHGDETATPMCLENQVKHEDRNDQLVALESEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKDEDLDAVYRERSDDQAVLSEAGVPSLYDLQNFQMDEMFDVEELLSLIYSDSLHDPTNILKGNADGYTNMAPSQIGSVGSEKPPNRSYQFQNPDTKLLGSLQQMERTPADIDYGFDFLKQGREEDLNAAADDCVRYLNEIGDLGF* 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1873960 1875246 - Chy3G051790.1 Chy03g00199 222360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00199 428 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 Gene3D AP2/ERF domain 85 143 IPR036955 GO:0003700|GO:0006355
Chy03g00199 428 MobiDBLite consensus disorder prediction 204 223 - -
Chy03g00199 428 CDD AP2 84 143 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 20 329 - -
Chy03g00199 428 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Chy03g00199 428 MobiDBLite consensus disorder prediction 165 187 - -
Chy03g00199 428 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 20 329 - -
Chy03g00199 428 MobiDBLite consensus disorder prediction 1 34 - -
Chy03g00199 428 SUPERFAMILY DNA-binding domain 85 142 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g00199 Chy10g00356 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00199 Chy-Chr3:1873960 Chy08g00608 Chy-Chr8:13894298 8.06E-43 dispersed
Chy03g00194 Chy-Chr3:1804585 Chy03g00199 Chy-Chr3:1873960 1.45E-21 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17648 PF00847 AP2 1.10E-14 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00199 - K09286 csv:101215431 726.857