Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00215 ATGGCTGATTTAGGATTGAAAACAGTTTTGATTTTGACTTTGGGTTTCTTTTTGCTCTTTTTGGGCAATGTATCAGCTCAACTTTCTACTGGTTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACTGTCAAATCCTCTGTTCGTTCTGCTGTCTCAAGTGAAGCTCGCATGGGAGCTTCAATTCTTCGCTTGTTTTTTCATGATTGTTTCGTCAATGGTTGCGATGGGTCAATTTTGTTAGACGACACGTCGAGCTTTACCGGAGAGAAAAATGCTAACCCCAACAGAAACTCTGCTAGAGGCTTTGATGTTATTGATAACATCAAAACCGCTGTTGAAAAAGCTTGTCCTGGTGTTGTTTCTTGCGCTGATATTCTTGCTATTGCTGCCCGTGATTCTGTCGTTCTTCTAGGAGGGCCGAGTTGGAATGTGAAGTTAGGAAGAAGAGACTCCACAACTGCGAGCCAATCCCAAGCGAACAACGACATCCCCGGGCCAACTTCAAGTCTTAGCCAACTCAGCTCTAGATTTAGTGCTCTTGGACTTTCCAACACTGACTTGGTCGCTCTTTCAGGCGGGCACACAATTGGACAAGCGCGTTGCACGACATTTAGAAGCAGAATATACAGTAACAGCTCAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAACTGCCCCAACACATCAGGAACTGGAGACAATAATTTGGCTCCTTTGGATTTTACTCCAACCTCATTTGATAACAACTACTACAAGAATCTTGTTCAAAACAAGGGCCTCTTACAATCTGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCGTTGTTCAAAATTACGCAAATGCCCCTGCCCGTTTCTTATCTGATTTTGCTGCCGCCATGGTCAAGATGGGAGACATCGCTCCTCTTACTGGCTCCAATGGTCAAATTAGGAAGAACTGCAGGAAGGTTAATTAA 969 43.34 MADLGLKTVLILTLGFFLLFLGNVSAQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDSTTASQSQANNDIPGPTSSLSQLSSRFSALGLSNTDLVALSGGHTIGQARCTTFRSRIYSNSSNIESSFARTRQSNCPNTSGTGDNNLAPLDFTPTSFDNNYYKNLVQNKGLLQSDQVLFNGGSTDSVVQNYANAPARFLSDFAAAMVKMGDIAPLTGSNGQIRKNCRKVN* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2013946 2015460 + Chy3G051950.1 Chy03g00215 222376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00215 322 CDD secretory_peroxidase 27 321 IPR033905 GO:0004601|GO:0042744
Chy03g00215 322 SUPERFAMILY Heme-dependent peroxidases 27 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 Gene3D - 31 322 - -
Chy03g00215 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Chy03g00215 322 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 PANTHER PEROXIDASE 8 322 - -
Chy03g00215 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Chy03g00215 322 PANTHER PEROXIDASE 72-RELATED 8 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g00215 322 MobiDBLite consensus disorder prediction 148 171 - -
Chy03g00215 322 Gene3D Peroxidase, domain 2 165 301 - -
Chy03g00215 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00611 Chy-Chr2:3712025 Chy03g00215 Chy-Chr3:2013946 1.36E-114 dispersed
Chy03g00215 Chy-Chr3:2013946 Chy10g00053 Chy-Chr10:1309998 1.47E-137 dispersed
Chy10g01087 Chy-Chr10:15964073 Chy03g00215 Chy-Chr3:2013946 8.21E-100 dispersed
Chy01g00330 Chy-Chr1:2365707 Chy03g00215 Chy-Chr3:2013946 8.68E-126 transposed
Chy02g00555 Chy-Chr2:3336023 Chy03g00215 Chy-Chr3:2013946 1.33E-16 transposed
Chy02g01195 Chy-Chr2:8602860 Chy03g00215 Chy-Chr3:2013946 5.92E-88 transposed
Chy12g00341 Chy-Chr12:3595527 Chy03g00215 Chy-Chr3:2013946 2.52E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00215 K00430 - csv:101218447 601.282