Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00237 ATGGCGGATCTGATTCCACCACCACACAGATCGGCCAACGACCTCTTTTCCGATCCACTTGATTCTCATCCTCTCTGGTTCAAGCCCGACCTATTCCTCTCCCCCAATTTTGATTCCGAGTCCTACATTTCTGAGCTTCGAACATTTGTCCCATTTGACACCCTCCGATCTCAGCTCCACTCTCATCTTTCCGCTCTCAACCGTGAGCTCATTGATTTGATCAATCGTGACTATACCGATTTTGTCAACCTGAGCACAAAGCTTGTCGATGTGGAAGCGGCAGTCGTGCGAATGCGAGCTCCTTTGGTTGAACTCAGGGAGAAAATTGAGCAATTCAGGGGTTCCGTGGATTTCTCTCTCTCAGCTTTGCAAAATGGATTGCGGCAGAGATCAGAGGCAGCTTCAGCCAGAGAGGTCTTGGAATTGTTGCTTGATACATTTCACGTCGTGTCGAAGGTTGAAAAATTAATCAAGGAGCTTCCAAGTGCACCTGCTGATGGCTCAAATGGAACTATGAATTTAACAGATAAAAGTGGATTAAGTAATGGTGCTTCTTTACCACACATGGAGAACGGAACAAATCTTAGGGAAACACAAAGCATGCTCTTGGAAAGAATTTCCAGTGAAATGAACCGGCTAAAATTTTACATCGCTCATGCACAGAATCTTCCCTTCATTCAAAATATGGACAAGAGGATTCAGAGTGCCAGCCTTTTGTTGGACACGAGCTTGGGACATTGTTTTGTTGATGGACTTGCACATCACGATGAAAATGCTATTTACAACTGCCTACGTGCCTATGCTGCCATAGATAACACCACAAGTGCAGAAGAAATTTTTCGCACTACTGTTGTATCACCAGCAATTCATAAAGTTATTCCTCATAAAGTTTCGGGCATGGACGCTGGGTCATCCGATGATGATTTGGAGAATGATTACAAGCAAATGAAGCAATATATTGATAAAGACTGCAAATTTTTGTTAGAAATATCTGCTACAGAAAACTCAGGACTACATGTATTTGATTTCTTGGCTAATTCAATCCTGAAAGAGGTTCTCTCTGCTATCCAAAAGGCAAAACCAGGTGCATTTTCCCCAGGGAGACCTACTGAATTCTTGAAGAATTACAAGTCGAGCCTTGATTTCTTGGCATACTTGGAAGGCTATTGTCCATCCAGATCTGCTGTTGCTAAATTTCGAGCAGCATCTGTATATAATGAGTTCATGAAGCAATGGAATATTGGGGTTTATTTTTCTCTGAGGCTTCAGGAAATAGCTGGAGCTTTGGATTCGTCACTGTCAGCACCTATTCTAACCCCCGTACAAACTTCATCTTCTGGCCGGGGAAACAATCAGGATCTAACATTAAAGCAGAGTGTAATGCTTTTAGACTGCCTGACAGCATGCTGGAGAGATGATGTTCTTGTCCTTTCTTGTTCTGACAAGTTTCTTCGTCTATCTTTGCAGCTCCTTTCAAGATACTCTAACTGGTTGTCATCTGGTCTAGCTGCCCGTAAAACGGGTACAGGCTCCCATCCAGGTTCAGAATGGGCTGTAGGAGCTACCCCCGACGATTTAATATACATAATCCATGACCTTGGTTATCTATACACGGTGGTAACTGGTAACTTCTTGGAAACTGTACTTCAGCTTCTCTCGTCATGCACTGTAGATGTTCTTGATTCAGTAAAGCAGAGCATTTTGCACGGTGGAAAACCATTGTATAATTTAATGCCCAAAGTTATTGGTGCCATAGTTGCTTCACTGGTTGAGAAGTCTGTTGAGGACTTGAGACAGCTGAAGGGTATTACAGCAACGTACAGGATGACCAATAAACCACTACCTGTAAGGCATTCACCCTATGTATCAGGGTTGCTACGCCCTCTGAAGGCCATATTAGATGGAGACAGGGCGTCAACTTTTTTGACAACGGAAACAAGGACTGCACTGTTGACGGATGCTGTGACTGAGATTACTTCTCGTTATTATGAGCAAGCAGCTGATCTTGTTAGCTTGGCTAGGAAAACAGATTCGTCACTCCAGAAAATTCGGCAGGGAGTACAAAGACGAGCTGGAGCAAGCTCAGATGTTTCAGACCATAACATCTCCGACACTGACAAGATTTGCATGCAACTCTTTCTCGATATTCAGGAGTATGGTCGCAACCTTTCAGTCCTAGGGGTTGAAGCAGCGAGTATTCCAACATACCGTTCATTTTGGCACTTGGTTGCTCCTTCGGACAAGCAAAGCTCCATTAATTCAACAGCGAAGCTTCGATGGGATCTGATTCATTTTAGAGTAAAAATAATTTGCGGTGAGCGTGGATCGAACACGCGACCTTCAGATCTTCAGTCTGACGCTCTCCCAACTGAGCTATCCCCGCATTTTGTTTTAAACCTGATCATGAAAGGTTGCAAGCATGCTAGAAACAACTGGGGTTTCGACATTTTAAAAGCTAAAGCAAGGACGATTGGCCTAATCGAGATCAAGCCCAAAACCCTAACAAATAACAACCCCCCTCTTACTGCACGCCCCGGCACCTCCAAAACTCCATCTCGAGAGAGAAGTCGCATCACTTTGATGGCGGTCGCTTTCCCAGATGTCAAGTCAGCATCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCTAAGGATGATGTTACCGTTTACGAAGCGCTCTCCAAACCCGTATCCAGCGAATATGTTAACGTGTCTAGGTGGTCCAATCACATCGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTGGACGCAGTTGCAACCCCACCGGCTGCTGATGCAAAGGCTGCCGATGATGATGATGATGATGATGATGACATGGATCTATTTGGAGAAGAGACCGAAGAGGAGAAGAAGGCTGCTGAGGAGCGCGCAGCTGCCATCAAGGCTTCTGCAAAGAAGAAAGAGAGTGGAAAATCATCAGTTCTGATGGATATCAAACCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGGAGTGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTTGTCCCTGTTGGATATGGTATTAAGAAATTGCAGATAATGCTCACAGTTGTTGATGACCTTGTGTCTGTTGACAATCTCATTGAGGAACATCTGACAGTTGAACCCATAAATGAGCATGTTCAGAGCTGTGACATCGTTGCCTTCAACAAAATATACCCGAGAGCTGGTGGTTTCAAAGATGTTGAATTCGGGAAGATGTTTTATAGAAGCCTCTGTTTCTACTTTCTAGTTCTTCATACTTGTTTTGACAATGCTTGA 3357 44.12 MADLIPPPHRSANDLFSDPLDSHPLWFKPDLFLSPNFDSESYISELRTFVPFDTLRSQLHSHLSALNRELIDLINRDYTDFVNLSTKLVDVEAAVVRMRAPLVELREKIEQFRGSVDFSLSALQNGLRQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSAPADGSNGTMNLTDKSGLSNGASLPHMENGTNLRETQSMLLERISSEMNRLKFYIAHAQNLPFIQNMDKRIQSASLLLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRTTVVSPAIHKVIPHKVSGMDAGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQKAKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYFSLRLQEIAGALDSSLSAPILTPVQTSSSGRGNNQDLTLKQSVMLLDCLTACWRDDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLAARKTGTGSHPGSEWAVGATPDDLIYIIHDLGYLYTVVTGNFLETVLQLLSSCTVDVLDSVKQSILHGGKPLYNLMPKVIGAIVASLVEKSVEDLRQLKGITATYRMTNKPLPVRHSPYVSGLLRPLKAILDGDRASTFLTTETRTALLTDAVTEITSRYYEQAADLVSLARKTDSSLQKIRQGVQRRAGASSDVSDHNISDTDKICMQLFLDIQEYGRNLSVLGVEAASIPTYRSFWHLVAPSDKQSSINSTAKLRWDLIHFRVKIICGERGSNTRPSDLQSDALPTELSPHFVLNLIMKGCKHARNNWGFDILKAKARTIGLIEIKPKTLTNNNPPLTARPGTSKTPSRERSRITLMAVAFPDVKSASGLKKLDEYLLSRSYISGYQPSKDDVTVYEALSKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKLDAVATPPAADAKAADDDDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTVVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKIYPRAGGFKDVEFGKMFYRSLCFYFLVLHTCFDNA* 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2245309 2261648 - Chy3G052170.1 Chy03g00237 222398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00237 1118 Pfam COG complex component, COG2, C-terminal 588 716 IPR024603 -
Chy03g00237 1118 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 1073 1084 IPR001326 GO:0003746|GO:0005853|GO:0006414
Chy03g00237 1118 Gene3D - 857 935 - -
Chy03g00237 1118 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 959 967 IPR001326 GO:0003746|GO:0005853|GO:0006414
Chy03g00237 1118 SMART EF1_GNE_2 995 1084 IPR014038 GO:0003746|GO:0006414
Chy03g00237 1118 Coils Coil 967 987 - -
Chy03g00237 1118 PANTHER BNAA01G14200D PROTEIN 9 752 - -
Chy03g00237 1118 CDD EF1B 993 1084 IPR014038 GO:0003746|GO:0006414
Chy03g00237 1118 Pfam EF-1 guanine nucleotide exchange domain 997 1084 IPR014038 GO:0003746|GO:0006414
Chy03g00237 1118 MobiDBLite consensus disorder prediction 945 982 - -
Chy03g00237 1118 MobiDBLite consensus disorder prediction 952 968 - -
Chy03g00237 1118 SUPERFAMILY GST C-terminal domain-like 868 929 IPR036282 -
Chy03g00237 1118 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Chy03g00237 1118 Gene3D - 988 1084 IPR014717 -
Chy03g00237 1118 SUPERFAMILY eEF-1beta-like 992 1084 IPR036219 -
Chy03g00237 1118 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 9 752 IPR009316 GO:0007030|GO:0015031|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00237 Chy-Chr3:2245309 Chy12g01174 Chy-Chr12:16613446 6.69E-103 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00237 K20289 - csv:101215350 1450.26