Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00264 ATGGACGGCCCCCCTGTGGGCGATATCTGTTCAATCTGCCATGGAAGATTCAACATCCCTTGTCAAGCAAATTGTTCGCACTGGTTCTGCGGCAAGTGTATAATGCTTGTCCGGGATCATGGATCACCACTACAGCCATGCAAATGCCCCTTATGTCGTCGTTCAATCACTTTATTAGTTCCTTCGGAGGTTTCACCAATTCAACAAAGTGACCCAGAGGTTGCACGCGTTCTTAACAATATTAGGACTTATAACCGTCATTTCAGTGGCAACTCAACTGATTTAAGTCAGCGATTGCAGGACCTTCCTTTTCTCCTGCGGAGGTTGCTTCAAGAACTCCGCAATCCACAGAGATCTCTTCCTCTTGTCATTCGAACACGTGTTTACATTGCAATGGTACTAAGTGTAATCTACACCGTGAGTCCCATCGATATCATACCAGAAGCATTACTAGGATTATTTGGACTGATGGATGATATCGTTATACTGCTCATATGCTTCCTTTACATTGCTGCTATGTACCGATCTGTACTCTATAATCGTCATGGAGGAACTTGA 558 44.27 MDGPPVGDICSICHGRFNIPCQANCSHWFCGKCIMLVRDHGSPLQPCKCPLCRRSITLLVPSEVSPIQQSDPEVARVLNNIRTYNRHFSGNSTDLSQRLQDLPFLLRRLLQELRNPQRSLPLVIRTRVYIAMVLSVIYTVSPIDIIPEALLGLFGLMDDIVILLICFLYIAAMYRSVLYNRHGGT* 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2687483 2693069 - Chy3G052440.1 Chy03g00264 222425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00264 185 PANTHER UNCHARACTERIZED 3 184 IPR038896 GO:0061630
Chy03g00264 185 PANTHER BNAC07G13660D PROTEIN 3 184 - -
Chy03g00264 185 SMART ring_2 10 52 IPR001841 -
Chy03g00264 185 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Chy03g00264 185 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Chy03g00264 185 SUPERFAMILY RING/U-box 8 59 - -
Chy03g00264 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 115 IPR013083 -
Chy03g00264 185 Pfam Protein of unknown function (DUF1232) 130 164 IPR010652 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00264 K15707 - cmo:103501307 347.436