Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00265 ATGGCCACTCTTCACCAAACCGCCTCCTCTCTTCAGGCCAAGCTCCTTCCAACCGCTCGAATCTCCCGAACCACTCCCGTAAACCTCTCCTTCTCCGCCACTTTTCCTTCTAGCGGACTCCGCCTCGTCCAGCACCGCTCTCACGGCGGCGCAAGAATGTCGGCCACAGCCGCCGGAAGCTACGCTGCAGCACTAGCCGAAGTGGCAGCGTCGAACAACACACTTGACGCCACAAGCAGCGACGTGGAGAAGATCGAGAGCGTGTTTGCGGATCAACGGGTGTTCGATTTCTTCGCGAATCCAACGATTAGCGTGGAGAAGAAACTGGCAGTGGTGGATGAAATGGCTTCTTCGTCATCTCTACAGCCGCATTCAGCAAATTTCTTGAAGATCTTGGTGGATGCGAAGAGAATCGACATCCTGAAGGAGATAGTTACGGAGTTTGAATTGGTTTTTAACAAGATAACGAACACGGAGCTTGCGGTGGTGAGTTCGGTTGTGCAATTGGAGCAGCAACATTTGGCGCAAATCGCGAAACAGGTGCAGAAATTGAGTGGAGCGAAGAATGTAAGGATAAAGACGCAGATTGATCCAAGTTTGGTGGCTGGATTCACAGTCAGGTTTGGGAATTCTGGATCCAAACTCATTGATTTGAGTGTTAAGAAACAGCTTGAGGAAATTGCTGCTCAGCTTGATCTTGGCAATATTCAACTGGCTGTATGA 723 50.48 MATLHQTASSLQAKLLPTARISRTTPVNLSFSATFPSSGLRLVQHRSHGGARMSATAAGSYAAALAEVAASNNTLDATSSDVEKIESVFADQRVFDFFANPTISVEKKLAVVDEMASSSSLQPHSANFLKILVDAKRIDILKEIVTEFELVFNKITNTELAVVSSVVQLEQQHLAQIAKQVQKLSGAKNVRIKTQIDPSLVAGFTVRFGNSGSKLIDLSVKKQLEEIAAQLDLGNIQLAV* 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2705224 2705946 - Chy3G052450.1 Chy03g00265 222426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00265 240 Gene3D - 57 149 IPR026015 -
Chy03g00265 240 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 58 231 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 190 209 IPR020781 GO:0015986|GO:0016020|GO:0046933
Chy03g00265 240 PANTHER BNACNNG66500D PROTEIN 47 239 - -
Chy03g00265 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 54 157 IPR026015 -
Chy03g00265 240 Pfam ATP synthase delta (OSCP) subunit 58 231 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PANTHER ATP SYNTHASE DELTA CHAIN 47 239 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 Hamap ATP synthase subunit delta [atpD]. 53 233 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PRINTS ATP synthase delta subunit signature 188 203 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PRINTS ATP synthase delta subunit signature 57 76 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PRINTS ATP synthase delta subunit signature 137 151 IPR000711 GO:0015986|GO:0046933
Chy03g00265 240 PRINTS ATP synthase delta subunit signature 126 137 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00265 Chy-Chr3:2705224 Chy06g00077 Chy-Chr6:522344 9.89E-21 dispersed
Chy03g00265 Chy-Chr3:2705224 Chy01g01866 Chy-Chr1:24086489 1.26E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00265 K02113 - csv:101211740 412.92