Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00317 ATGAACCTCGCTACTCTTGTTTTCTGGATCATCCAGATATCCATCCATGGAGTTGGAGTTTTCTCTAAAACGAAAGCACCAGACGTTTCTGCATTGAATGTGATGTTTAGTAGTTTAAATTCACCTTCACAACTCTCTGGTTGGGGGTCAAGTGGGGGTGATCCATGTGGAGATTCTTGGGAAGGGATTCAATGCTCAGGATCATCCGTCACTGAAATAAGTTTATCAGATTTTGGACTAAGTGGATCAATGGGTTACCAGCTTTCAAATTTGGCATCTGTCACCTACTTTGATTTGAGCAAGAACAACCTCAATGGTGATATCCCCTACCAACTTCCCCCTAATGCAGTTCACATCGATCTTTCTGGGAACAGTTTCACTGGTAGTGTGCCTTATTCAATATCACAGATGAGTGAACTTGAATTTCTAAATCTTGGTCATAACAAGCTTAGCAATCAACTGAGTGAAATGTTTGGCAAGCTGGCTAAACTCAAAAGACTGGATCTGTCCTACAACTCAATTTCAGGAAACTTACCTCAAAGTTTTAAGAAGCTTTCAAGCCTTACCGTATTGCATATACAAGATAATAAATTTTCAGGTTCAATCAATGTTCTTGCTGACCTTCCACTTGATGATTTGAATGTTGCAAATAACAAATTCACTGGATGGATTCCTGACAGTCTTGAAGATATAGATAACTTGGAAACTGTAGGAAATTCTTGGTCAACTGGACCAGCACCCCCTCCACCACCAGGGACGGTATCTCCAACGAACAAGAAATCAAACAAGGAGGAGTCAAACAAGATCAATTCGGCAGTGAAAAGTGGGTTAGTGATAGCAGGAATAGCAATGGGAGTATTAGCAATAATAGCAATAGTGATTGGAATGGCATCAAAAAGGAGGAGGCATGTATCTCATTATCTTGATGAAGACACAAGTCAACACAGATCATTCACTCCACTCACTTCCCAAGAACTCCCAAAGGGTAATGATAATAATGGGATTGATAGAAAATCCTTCAATTCAGATGCGTCTGTTGACATAAAAGGTGGTGTGGTTAGACCACCACCAGCTCCTTTAGATTCTATTCGGTCCTTCAGTGATAATCAGTTTGCAAGCCGTCTGAATTCGAGGAGGAGAAGCAATTCGTTTCGTGCAATTTCTTATTCATTGGTCGATTTGCAAACTGCCACTGCTAATTTTTCTCCTTCTCGACTTCTTGGTGAGGGTACTATTGGACGTGTTTATAAGGCCAAGTATGGAGATGGAAAGGTATTGGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGGAGGAGAACAGAGGAGTTCAGTGAAGTAGTAGCAATAATTTCAAAGCTTAATCACACAAACATAGCAGAAGTGGTTGGATTTTGTTCAGAGCAGGGACATCATTTGTTCATTTATGAATTTTTCACGAATGGTTCACTTCATGAGTTTCTTCATATGTCTGATGACTTCAGTAAACCACTCACTTGGAACACCAGAGTCAGAATTGCTTTGGGGACAGCAAGAGCTCTTGAGTATCTTCACGAAGTTTGCTCGCCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTGCTTGATGCCGAACTTAATCCTCGTCTCTCGGACTACGGTTTGGCAACATTTTATAAGAGTAGAAGCCAAAACCCTGGAGGTGGATATGATGCTCCAGAATGCAGTACAAAGGGTTCAAGTTATACTATGAAAAGTGACATTCACAGTTTGGGAGTGGTGATGTTGGAATTGTTGACGGGCCGGATGCCTTTTGACTCGAGTAAGGCAAAAGTGGAACAATGTCTAGTGAGATGGGCAACGCCACAACTGCATGACATAGATGCGTTGGACAAAATGGTGGATCCTGCATTGAGAGGCTTATATCCACCAAAGTCGGTGTCTAGATTTGCAGATATAATTGCCCTTTGCGTTCAATCAGAGCCTGAATTTAGGCCTCCAATGTCCGAAGTGGTTCAAGCCTTGGTCACTTTGGTTCAACGTTCCAGTATGAATATGAGAGATGATCTTGGAAACTCTCGACGAATGGATGATTATGACTATTAA 2091 41.08 MNLATLVFWIIQISIHGVGVFSKTKAPDVSALNVMFSSLNSPSQLSGWGSSGGDPCGDSWEGIQCSGSSVTEISLSDFGLSGSMGYQLSNLASVTYFDLSKNNLNGDIPYQLPPNAVHIDLSGNSFTGSVPYSISQMSELEFLNLGHNKLSNQLSEMFGKLAKLKRLDLSYNSISGNLPQSFKKLSSLTVLHIQDNKFSGSINVLADLPLDDLNVANNKFTGWIPDSLEDIDNLETVGNSWSTGPAPPPPPGTVSPTNKKSNKEESNKINSAVKSGLVIAGIAMGVLAIIAIVIGMASKRRRHVSHYLDEDTSQHRSFTPLTSQELPKGNDNNGIDRKSFNSDASVDIKGGVVRPPPAPLDSIRSFSDNQFASRLNSRRRSNSFRAISYSLVDLQTATANFSPSRLLGEGTIGRVYKAKYGDGKVLAVKKIDSSVFQGRRTEEFSEVVAIISKLNHTNIAEVVGFCSEQGHHLFIYEFFTNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDAELNPRLSDYGLATFYKSRSQNPGGGYDAPECSTKGSSYTMKSDIHSLGVVMLELLTGRMPFDSSKAKVEQCLVRWATPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNMRDDLGNSRRMDDYDY* 697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3599734 3604315 - Chy3G052970.1 Chy03g00317 222478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00317 696 MobiDBLite consensus disorder prediction 235 267 - -
Chy03g00317 696 ProSiteProfiles Protein kinase domain profile. 401 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00317 696 MobiDBLite consensus disorder prediction 315 352 - -
Chy03g00317 696 Pfam Protein kinase domain 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00317 696 Pfam Leucine rich repeat 156 198 IPR001611 GO:0005515
Chy03g00317 696 Gene3D Ribonuclease Inhibitor 25 277 IPR032675 -
Chy03g00317 696 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Chy03g00317 696 SUPERFAMILY L domain-like 27 236 - -
Chy03g00317 696 Gene3D Transferase(Phosphotransferase) domain 1 479 693 - -
Chy03g00317 696 SUPERFAMILY Protein kinase-like (PK-like) 384 670 IPR011009 -
Chy03g00317 696 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 692 - -
Chy03g00317 696 PANTHER OS01G0253100 PROTEIN 19 692 IPR045271 GO:0004714|GO:0006468
Chy03g00317 696 Gene3D Phosphorylase Kinase; domain 1 365 478 - -
Chy03g00317 696 MobiDBLite consensus disorder prediction 315 340 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00369 Chy-Chr1:2634308 Chy03g00317 Chy-Chr3:3599734 1.37E-155 dispersed
Chy01g02121 Chy-Chr1:25887747 Chy03g00317 Chy-Chr3:3599734 0 dispersed
Chy03g00317 Chy-Chr3:3599734 Chy12g00528 Chy-Chr12:7317261 0 dispersed
Chy03g00317 Chy-Chr3:3599734 Chy04g00715 Chy-Chr4:8714168 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71119 PF00069 Pkinase 5.00E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00317 - - csv:101209107 1328.54