Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00328 ATGATTTATTTTGGTGGAGGAAATCAAAACCCAAAGAAGGAGTTGCCTGTCTGTGCTAACCTTCTTCATATGGCGTCAACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAAGATTCGACATTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGCTGCTAATGAGACATTCAAACTGAGATATTTGGTACAAGTACAAAAACTAATAAAAGAAAAAATTCTTGGAAGCAACATACAAGTAACTCCAAATCTAGAGTCGATGGTGAAAATTTTGAAGAAGCAGTACATTGCCATAACAGAGATGATAGGGCTAGTGTGTAGTGGGTTTGGTTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATTTGCGTTTGATGACTGGGTTAAGGGACACCCCAATGCTCGAGGCCTACTAAACAAACCATTTCCCTACTTATATGACTTGGAAATTGTGTTTGGTAGAGATAAGGCTACTAGTGGCAGATGTAAGACACCTGTTGAAATGGGCTCACAGACCGTAAAATATATTGAGAAAAATGACATGAGATTAATCTCGAAGACTTTGATATTCCAAATCCACATGGATTCGAGCCATCATCAAGGGAGGACATGCCATCCACTCCAACAAGTATGGCACATCATGCAGGATCATCTAAGCCAAGTAAGAAGAAGCAGTCATATTCAGGGAACCTCATGGATACATTTCGCACAAGTATGCGAGAAACTTCCAAGGAAATTGAAAGATTGCTGCATGAGCTTTGAAAATCCAGAGCAGTTCTATGCCCATACTTCTTCTTCTTCAATCTTTCTTCGGGGAGATGATAGTGGAAGATTTCATACGCGTTTTCTTCCGGACATTGAGGAACTTCAACAATCCGCTGTTGCTATTGCTGCTTTTCATCAAGATGATGCTGTTGATTTAAGCCCAAGCTCTGTTTTCGGTTTAAAATCGACCCACAATACAGCTTTTCCAATCCACCTACCGTACGGGAACACGGATGTGGTTTCCATAGGACGAACGGGGTATTTAGATACAGGACAGGAATTGATGCGGTTGAAAAGGGTGGCTCCGCCGCATTCGCTGGCGGTGACGGTCGCAGCTTCGTCATCGTTGGGAAATGGGAGCTTTGAGAACTGGGGAGAGTCAGCCATGGCAGATAATAGCCAACAGACTGACACTTCCACAGACATCGACAATGATGAAAGAAACCAGTTCCAAGGAGCTGTACATGGAGCTCTCATGGCGGTGGACTCCATGGATCAATCTAAAGCAAAATCTGCAGATCAAAAGACTCTGCGTCGACTTGCTCAGAATCGAGAAGCAGCGAGGAAGAGTCGACTGAGGAAGAAAGCATATGTCCAGCAGCTGGAAAATAGTAGACAGAGGCTTGCGCAGCTAGAGCAGGAGCTTCATCGAGCACGTCAACAGGGCATTTTTGTGGCTTCGGGTGTAGGAGACCATTGTGCATCGATGGCAGGAAATGGTGCCTTGGCATTTGATCTTGACTATGCACGTTGGCTTGATGAGCATCAACGGCTTATAAATGATTTGAGAGCTTCGGCAAATTCTCAGCTTGGGGACGACGAATTGAGATTTCTTGTTGATGGGGTGATGACACATTATGATGAACTCTTTAGGCTGAAAAGTGTAGGCGCTAAGGCTGACGTATTCCACATTCTATCGGGGATGTGGAAAACTCCTGCTGAGAGGTGTTTCATGTGGCTGGGAGGATTTCGTTCGTCTGAGCTTCTAAAGATAGTAGGGAGCCATTTGGAGCCTTTAACAGATCAACAATTGATGGGTATATGCAATTTGCAGCAATCTTCTCAACAAGCTGAAGATGCGTTGTCACAAGGCATTGAAGCTTTGCAACAATCTCTTGTAGAAACTCTTTCCTCTGCTTCTTTAGGGCCAACCAGTTCTGGAAATGTCGCTGATTACATGGGCCAAATGGCGATTGCAATGAGCAAGCTAACTACGCTTGAGAACTTTCTACATCAGGCTGATCTTCTGCGGCAGCAAACACTCCAACAGATGCATCGGATATTAACTACTCGTCAAGCTGCACGAGCGTTACTTGTGATCAGTGATTACATTTCACGTCTTCGAGCTCTCAGTTCTCTTTGGTTAGCACGACCAAAGGAGTGA 2172 44.48 MIYFGGGNQNPKKELPVCANLLHMASTNSKATKHRWTTIEDSTLVECLLQLVEEGGWRAANETFKLRYLVQVQKLIKEKILGSNIQVTPNLESMVKILKKQYIAITEMIGLVCSGFGWNEERKCIEAEKFAFDDWVKGHPNARGLLNKPFPYLYDLEIVFGRDKATSGRCKTPVEMGSQTVKYIEKNDMRLISKTLIFQIHMDSSHHQGRTCHPLQQVWHIMQDHLSQVRRSSHIQGTSWIHFAQVCEKLPRKLKDCCMSFENPEQFYAHTSSSSIFLRGDDSGRFHTRFLPDIEELQQSAVAIAAFHQDDAVDLSPSSVFGLKSTHNTAFPIHLPYGNTDVVSIGRTGYLDTGQELMRLKRVAPPHSLAVTVAASSSLGNGSFENWGESAMADNSQQTDTSTDIDNDERNQFQGAVHGALMAVDSMDQSKAKSADQKTLRRLAQNREAARKSRLRKKAYVQQLENSRQRLAQLEQELHRARQQGIFVASGVGDHCASMAGNGALAFDLDYARWLDEHQRLINDLRASANSQLGDDELRFLVDGVMTHYDELFRLKSVGAKADVFHILSGMWKTPAERCFMWLGGFRSSELLKIVGSHLEPLTDQQLMGICNLQQSSQQAEDALSQGIEALQQSLVETLSSASLGPTSSGNVADYMGQMAIAMSKLTTLENFLHQADLLRQQTLQQMHRILTTRQAARALLVISDYISRLRALSSLWLARPKE* 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4065959 4084607 + Chy3G053080.1 Chy03g00328 222489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00328 723 MobiDBLite consensus disorder prediction 385 408 - -
Chy03g00328 723 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 441 456 IPR004827 GO:0003700|GO:0006355
Chy03g00328 723 Pfam Myb/SANT-like DNA-binding domain 35 129 IPR024752 -
Chy03g00328 723 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 307 723 - -
Chy03g00328 723 Pfam Seed dormancy control 522 595 IPR025422 GO:0006351|GO:0043565
Chy03g00328 723 Gene3D - 437 486 - -
Chy03g00328 723 Coils Coil 457 484 - -
Chy03g00328 723 SUPERFAMILY Leucine zipper domain 438 481 IPR046347 GO:0003700|GO:0006355
Chy03g00328 723 SMART brlzneu 434 505 IPR004827 GO:0003700|GO:0006355
Chy03g00328 723 Pfam bZIP transcription factor 437 477 IPR004827 GO:0003700|GO:0006355
Chy03g00328 723 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 436 480 IPR004827 GO:0003700|GO:0006355
Chy03g00328 723 PANTHER TRANSCRIPTION FACTOR TGA9 307 723 - -
Chy03g00328 723 CDD bZIP_HBP1b-like 438 490 - -
Chy03g00328 723 MobiDBLite consensus disorder prediction 385 402 - -
Chy03g00328 723 ProSiteProfiles DOG1 domain profile. 504 720 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00328 Chy-Chr3:4065959 Chy04g01664 Chy-Chr4:23054917 1.25E-163 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17656 PF12776 Myb_DNA-bind_3 1.40E-05 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00328 K14431 - csv:101210308 885.56