Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00405 ATGCTTGGAGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGACTCCGCCGTACCGGCGACTACGACACATCGTCAAGATGGGCTCATAGTGGACATGGATGAGAATAATAACAATTCTGGTGAAGATGAGAGAGGGAGAAGCAGCGGTGGCGGAGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTAGCTCTCTTGAAAATACGGTCAGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAATTTCCAGGAAATTGGGGGAGCTTGGGTATCATCGAAGTGCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACTAAAGAAGTTAGAAGTGGGAAACCAGATAGCAAAACTTACAAGTTCTTCGAACAATTGGAAGCTCTTGAAAATCACCCTCCTCTTAATTTCCATTCTCATTTGTCTAAACCAACTCCTCCCCCACCCCTACCGCCGCCGCCTACCACCGTCATTTCCCACATTCCTTCTACTACTGTTCCATCCACCACCACCACCACCACCCTACCTCACTTATTGAACATATCGTTCTCTCAACCAAACCCCACAATTCACCTCCCATCTCCTCCGCCCCCTCCCGGTCCGTTGCCATTGAATAACCCTACAAGTCTGCCCACCACCGTCCCTCCCGCTGTCCCTTTCCAAATCAATGTCTCTTCCACGGGAGTGGGAATGGGGTTTCAAAGCATTGAAGCAGATCTCATCTCAAACTCGACTTCTGATGATGTCAACTCGTCCACATCATCAGACGAGGCGTCGAGACGGAGGAGGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTGATGAAGGAAGTGATTGAAAAACAAGAGGAAATGCAAAAGAGATTCTTGGAAGCAATTGAGAAGAGGGAACAAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAAATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAGAGATCAATGGCGGCTGCAAAAGATGCCGCCATTACATCCTTTCTTCAAAAAATAACTGAATCCCAACACAACAATAACAACAACAATCCATCACAACTGTCGCCGCCGCCACCACCACCCCCATCACAGCAACAACAAATTCCAACGTCAAATCCGTCGCCAGTTGTGCATCCACAACAACAGCCGCAGCCGCAACCGCAAATGCAACCACCACTGCAGCCCGCACCACAAGCTTCCACATTGCAAGTGGTTGTTCCCAATTCCACCCCACAAAAAGTGGGGAATAATAATGAATTGTTGCAAATGGAGATAATGAAAATGGATCATAATGGTGGGGAGAATTATAGCATTAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTTGAAGTTCAAGCACTCATCAAATTGAGAACAAACCTTGAGACCAAATATCAAGAGAATGGGCCAAAAGGGCCATTGTGGGAAGAGATATCATCAGCCATGAAGAAACTTGGGTATAATAGAAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAATACTTCAAGAAAGTGAAGGAAAGTAGAAAAACAAGGCCTGAGGACTCGAAGACTTGCCCTTATTTTCACCAGCTCGATGCTTTGTATAGGGAAAAGAGCAACAATAACAACATGATCGCATCTTCCACGCCGATTATGCAGCATCAACAGCAGCCATTGATGGTTCGTCCCGAGCAACAATGGCCTCCTCAACAAGAGATCGCTCGCCCTGACTCGGGAAACGAGGAGATGGAGAGCGAACCAATGGATCGTGACGATAAAGACGACGACGATGAAGATGAAGAGGAAGAGGAAGAGGATGAAGGTGGAGGGAACTATGAGATTGTGGCGAGCAAACCCGCTACCATGAGTGCTGCAGAGTGA 1956 47.09 MLGDSTTSVLGGGAGGDSAVPATTTHRQDGLIVDMDENNNNSGEDERGRSSGGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQISRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSKPTPPPPLPPPPTTVISHIPSTTVPSTTTTTTLPHLLNISFSQPNPTIHLPSPPPPPGPLPLNNPTSLPTTVPPAVPFQINVSSTGVGMGFQSIEADLISNSTSDDVNSSTSSDEASRRRRRKRKWKDFFERLMKEVIEKQEEMQKRFLEAIEKREQERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLQKITESQHNNNNNNPSQLSPPPPPPPSQQQQIPTSNPSPVVHPQQQPQPQPQMQPPLQPAPQASTLQVVVPNSTPQKVGNNNELLQMEIMKMDHNGGENYSISPASSSSRWPKVEVQALIKLRTNLETKYQENGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESRKTRPEDSKTCPYFHQLDALYREKSNNNNMIASSTPIMQHQQQPLMVRPEQQWPPQQEIARPDSGNEEMESEPMDRDDKDDDDEDEEEEEEDEGGGNYEIVASKPATMSAAE* 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5822256 5824899 - Chy3G053850.1 Chy03g00405 222566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00405 651 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 24 644 - -
Chy03g00405 651 PANTHER - 24 644 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 369 426 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 211 228 - -
Chy03g00405 651 Pfam Myb/SANT-like DNA-binding domain 472 559 IPR044822 -
Chy03g00405 651 Pfam Myb/SANT-like DNA-binding domain 65 151 IPR044822 -
Chy03g00405 651 ProSiteProfiles Myb-like domain profile. 466 530 IPR001005 -
Chy03g00405 651 CDD GT1 65 130 - -
Chy03g00405 651 CDD GT1 473 537 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 40 54 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 162 180 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 403 421 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 609 635 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 265 287 - -
Chy03g00405 651 Gene3D - 67 128 - -
Chy03g00405 651 Gene3D - 474 535 - -
Chy03g00405 651 Coils Coil 291 322 - -
Chy03g00405 651 ProSiteProfiles Myb-like domain profile. 65 123 IPR001005 -
Chy03g00405 651 MobiDBLite consensus disorder prediction 181 210 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 379 395 - -
Chy03g00405 651 SMART sant 63 125 IPR001005 -
Chy03g00405 651 SMART sant 470 532 IPR001005 -
Chy03g00405 651 MobiDBLite consensus disorder prediction 589 651 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 156 228 - -
Chy03g00405 651 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00405 Chy-Chr3:5822256 Chy09g01362 Chy-Chr9:15463264 5.49E-15 dispersed
Chy11g01831 Chy-Chr11:24665080 Chy03g00405 Chy-Chr3:5822256 2.01E-06 dispersed
Chy03g00403 Chy-Chr3:5743215 Chy03g00405 Chy-Chr3:5822256 1.37E-06 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17663 PF13837 Myb_DNA-bind_4 3.10E-21 CL0123 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00405 - - csv:101205810 982.245