Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00502 ATGACCGTCGATGGCTTACTTCCTAATGCCTTCGATTCTAATCCCACTGAATCCTCTGTTCTCTTAGATGCTCAGATTACTCTTGTTGATTCTCCTAACCCCTCTTCTCTTCCCATCAATACAACCACCCCCACCACCACTAATTCCTCTGCCGTCATCGATAGTAATCATAATTCTTCCTCTGCTGCACCTCCCCCTAAAACTGTGGATGATGTGTGGAGGGAGATTGTTTCTGGTGAGAGGAAGGAATTGAAGGAGGAGGTTGCTAATGAGATCATAACCCTTGAGGATTTTCTTATGAAATCTGGAGCTGTGCCTGTTGAGGATGTCAAATTCACTCAGACTGAGAGGCTCAGTGGTGGGATTTTTTCGTTTGATCCAATTCCTTCCACCACATTCCAGGCATTGGATAAGGTTGAGGGATCCATTATTGGGTTTGCTAATGGGGTTGATTTGATTGGTAGTGGTGGAAGTGTGGGGAGAGGTAAAAGAGGTCGAGCTGCTTTGGAACCTTTAGATAAAGCTGCAGAGCAAAGACAGAGGAGGATGATCAAGAACAGGGAGTCTGCAGCAAGGTCTAGGGAACGGAAGCAGGCTTATCAAGTGGAATTAGAGTCGTTAGCTGTGAGATTAGAAGAGGAGAATGAGCAACTTTTGAGGGAAAAGGCCGAGAGGACTAAAGAGAGACTCAAGCAGCTACTGGACAAGGTGATTCCTGTGGTTGAAAAGCGACGACCCCAACGAGTGATTCGGCGAGTTAATTCCATGCAATGGTGA 777 46.2 MTVDGLLPNAFDSNPTESSVLLDAQITLVDSPNPSSLPINTTTPTTTNSSAVIDSNHNSSSAAPPPKTVDDVWREIVSGERKELKEEVANEIITLEDFLMKSGAVPVEDVKFTQTERLSGGIFSFDPIPSTTFQALDKVEGSIIGFANGVDLIGSGGSVGRGKRGRAALEPLDKAAEQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLREKAERTKERLKQLLDKVIPVVEKRRPQRVIRRVNSMQW* 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6948342 6951798 - Chy3G054820.1 Chy03g00502 222663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00502 258 MobiDBLite consensus disorder prediction 31 65 - -
Chy03g00502 258 Coils Coil 197 236 - -
Chy03g00502 258 Gene3D - 176 237 - -
Chy03g00502 258 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 176 228 IPR004827 GO:0003700|GO:0006355
Chy03g00502 258 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 257 IPR043452 GO:0003700|GO:0045893
Chy03g00502 258 MobiDBLite consensus disorder prediction 31 68 - -
Chy03g00502 258 Pfam bZIP transcription factor 176 237 IPR004827 GO:0003700|GO:0006355
Chy03g00502 258 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 181 196 IPR004827 GO:0003700|GO:0006355
Chy03g00502 258 CDD bZIP_plant_BZIP46 178 224 - -
Chy03g00502 258 SUPERFAMILY Leucine zipper domain 179 229 IPR046347 GO:0003700|GO:0006355
Chy03g00502 258 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 1 257 - -
Chy03g00502 258 SMART brlzneu 174 236 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00502 Chy-Chr3:6948342 Chy05g00480 Chy-Chr5:5155920 2.03E-42 dispersed
Chy03g00502 Chy-Chr3:6948342 Chy01g00061 Chy-Chr1:447463 3.41E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17671 PF00170 bZIP_1 4.00E-13 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00502 K14432 - csv:101223110 445.277