Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00517 ATGGATCCCAACAAATTAAACCTAAATAATTTGGAGCAACAGCAATCTACTTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGCGCACAATGGCTGCGCGCCGCAGTACTCGGCGCCAACGACGGCCTTGTCTCGACCGCGTCTCTCATGATGGGAGTTGGAGCTGTCAAACAAGACATCAAGGCCATGATCCTCACCGGTTTCGCCGGTCTAGTAGCTGGTGCGTGTAGTATGGCGATTGGCGAATTTGTGTCTGTTTACTCTCAGCTAGACATCGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGATCAAATAATATGGAAGGAGGAGTAGTACAAGGGCAAGAGAGCAAAGATAAAGAAAAGCTACCAAATCCACTCCAAGCAGCTGCAGCCTCAGCCTTGGCCTTCTCTCTTGGAGCAATGGTCCCATTGTTGGCTGCTTCCTTTATAAGAGAATATAAAGTAAGACTCGCAGTGGTCGTTGCATCGGTGACGTTAGCTCTTGCCGTGTTCGGGTGGTTAGGTGCTGTTCTTGGAAAAGCATCACCAATCAAATCAGCTGCTAGAGTGTTGGTCGGTGGTTGGTTAGCTATGGCTATAACCTTTGGCTTAACGAAGCTAATCGGAGCCAGTGGACTCTAG 654 47.25 MDPNKLNLNNLEQQQSTLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSNNMEGGVVQGQESKDKEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVASVTLALAVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL* 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7146739 7147392 - Chy3G054970.1 Chy03g00517 222678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00517 217 Pfam VIT family 121 209 IPR008217 GO:0005384|GO:0030026
Chy03g00517 217 Pfam VIT family 34 110 IPR008217 GO:0005384|GO:0030026
Chy03g00517 217 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 19 214 IPR008217 GO:0005384|GO:0030026
Chy03g00517 217 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 19 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01287 Chy-Chr1:16269114 Chy03g00517 Chy-Chr3:7146739 5.83E-63 dispersed
Chy03g00517 Chy-Chr3:7146739 Chy05g00486 Chy-Chr5:5191715 8.17E-91 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00517 K22736 - csv:101204048 380.948