Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00519 ATGTCTGAACCTTCAACTTACTCAAACCACTTTCCTTCTCCTCTCACTTCCGTTTCGATGATGGATTTGAACTTTACTGCCCGGAAACCTCCGCATACGGCGGTGAGGATGGACATAGAACACATGCCTGAAGCTCCACACCGTACCTATCATCACCGCCGTTCCCACTCCGATACCTCCTTCCGTTTCGCTAATTTCGACGATCTTCTCCTCTTCGACTCTCCCGACATCGATTTATCTTCTGCTCTTCCTTCTCCCTCTCCCTCACCGTCCCCCACGCCGTCGGGGGCTCGTATGGCCGTCGATTCCTTTAATTCCAAGTCCCCTGAAGACGCCTGTACCACAAAACCTAGGGCTGGAAACGGTAACTCCGCTTCCTTCTTCAATTCTCACTATCGGAGCTTATCGATGGATTCCGACTTCTTCGAGGGCTTGGGGATGGCCGGAGATGGAAGTGACGGTGAAATACTTGGCGGGAGAGTGACGGCGGGGGAGAAGAAGATTGGTCGTCATAGGCATAGCAATTCCATGGATGGGTCTTTGACTTCCTCGTTTGAAGGTGATTCCACACTGGTAATTGATTCTTCCAAGAAGGCTATGGCACCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCTAAGAGGATTCTGGCGAATAGACAATCTGCTGCACGATCCAAGGAGAGAAAAATACGTTACACTAATGAATTAGAGAAGAAGGTGCAAATGCTTCAATCAGAAGCGACTTCCCTTTCTGCTCAGGTCACTGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGATTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACATTGAGGGAGGAAGTACAGCGACTTAAGATAGCCGCTGCCCAACTGCCTGTTGCAAATGGCAACTCATTCAACATGGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATTGCTTCAATTTGGCAACTCCCAGAATCATCAACAGCCACAGCTGCTTCACATGTCTCAGCCTGATGCTCGAGGAGGGTCTCCACCGTCCCAGCTTCCAGGAGCTTAA 1110 49.82 MSEPSTYSNHFPSPLTSVSMMDLNFTARKPPHTAVRMDIEHMPEAPHRTYHHRRSHSDTSFRFANFDDLLLFDSPDIDLSSALPSPSPSPSPTPSGARMAVDSFNSKSPEDACTTKPRAGNGNSASFFNSHYRSLSMDSDFFEGLGMAGDGSDGEILGGRVTAGEKKIGRHRHSNSMDGSLTSSFEGDSTLVIDSSKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFNMGGGLPPQFPPLQTSLLQFGNSQNHQQPQLLHMSQPDARGGSPPSQLPGA* 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7178412 7180220 + Chy3G054990.1 Chy03g00519 222680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00519 369 Pfam bZIP transcription factor 214 270 IPR004827 GO:0003700|GO:0006355
Chy03g00519 369 MobiDBLite consensus disorder prediction 321 369 - -
Chy03g00519 369 SUPERFAMILY Leucine zipper domain 214 266 IPR046347 GO:0003700|GO:0006355
Chy03g00519 369 MobiDBLite consensus disorder prediction 94 124 - -
Chy03g00519 369 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 26 354 - -
Chy03g00519 369 SMART brlzneu 210 274 IPR004827 GO:0003700|GO:0006355
Chy03g00519 369 Coils Coil 289 309 - -
Chy03g00519 369 CDD bZIP_plant_RF2 215 264 IPR044759 GO:0003700|GO:0006355
Chy03g00519 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 275 IPR004827 GO:0003700|GO:0006355
Chy03g00519 369 Coils Coil 237 257 - -
Chy03g00519 369 Coils Coil 265 285 - -
Chy03g00519 369 MobiDBLite consensus disorder prediction 330 352 - -
Chy03g00519 369 Gene3D - 213 265 - -
Chy03g00519 369 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 26 354 - -
Chy03g00519 369 MobiDBLite consensus disorder prediction 81 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00730 Chy-Chr1:5316807 Chy03g00519 Chy-Chr3:7178412 1.09E-51 dispersed
Chy01g01284 Chy-Chr1:16197847 Chy03g00519 Chy-Chr3:7178412 2.30E-125 dispersed
Chy03g00519 Chy-Chr3:7178412 Chy10g00314 Chy-Chr10:7869775 1.11E-63 dispersed
Chy03g00519 Chy-Chr3:7178412 Chy11g00653 Chy-Chr11:7905677 7.72E-18 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17674 PF00170 bZIP_1 3.30E-07 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00519 K20557 - csv:101215277 570.081