Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00521 ATGGCTGCAACTTCTGGTGCTGTGCTTACTGGATTGGGCTCACCCTTCCTCCGTGGAAGTAGCAGAACTCGGACCTTGCTGGCCGGAGCTAGAGGTGGTGTCAATGTTGTCAGCTCTAGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCTAAGAAGTCTTGGCTCCCTGGTGTTAGGGGTGGTGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCACTTCCAGGTGACTACGGCTTCGACCCATTAGGTTTGGGGAAGGACCCAGCATTTTTGAAGTGGTATAGAGAAGCAGAGCTAATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTCGGACAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTAGGAACCCAGCTTCTGCTAATGGGATGGGTTGAAAGCAAACGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCAACACCATGGTCGAGGACGGCAGAGAATTTCGCAAACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTTAAAGATGGGGTTTACATTGCAGACACGGAGAAATTGGAGAGATTGAAGTTGGCAGAAATCAAGCATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAAACACCATTGGGTGCTCTTGGATTTTAA 768 51.43 MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGGVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGF* 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7204554 7205772 - Chy3G055010.1 Chy03g00521 222682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00521 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Chy03g00521 255 SUPERFAMILY Chlorophyll a-b binding protein 64 255 - -
Chy03g00521 255 Gene3D Chlorophyll a/b binding protein domain 67 253 - -
Chy03g00521 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 254 IPR001344 GO:0009765|GO:0016020
Chy03g00521 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00521 Chy-Chr3:7204554 Chy03g01543 Chy-Chr3:17608116 8.99E-38 dispersed
Chy03g00521 Chy-Chr3:7204554 Chy02g02491 Chy-Chr2:28417130 3.76E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00521 K08917 - csv:101204705 520.005