Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00525 ATGGCGGATATGGATTTTGTTGAAGGCGTTGGTGAGAGTTCTTCGCCGCCTCGAAGCTTTGCTGCTGGATTCTGTCCTGCCCACGATGTTCGGAACGATGTTTATACTAGGTTAGTTGAGTGTGGACATGAGGAGGCTGTTTCTAATCCTCAATTTCGCGAGAACTTGGATGCTCACTTCAATCGTTTGCCTCCGAGTTACGGACTTGATGTTAACATGGAGAAGGTGGAAGATGTTTTGTTACATCAAAAGCTTCTTTCCCTAGCAAAGGATCCAGAGAAGTGCCCTGTTTACCACATTCGTTTTCTTGAGCACATAAGTACTAAGTCAGATGGCAATGATGATCACGTTTTTCTTGATAGTATTCTTTTAAGTGGTTCATCTAATGAAGCAGCCGATAGAAGGCTTCCATTGTCACACAAAAGAACTCGAGGAAATATAATTGACTTTGAAGCTTGTTCCAAGCTGGAGGGCTTAAATTTGGATGTTAAAAAAAACTCAAAGGCCATGGATAGGAGGCCAGGTAATATTGGACATGTTCTGATACACGAAGTGATATTTTCAACGGTTGACAAGCCAAAGCTTCTTAGCCAGCTTTCTGCTTTGCTTTCTGATATAGGACTTAACATTCGAGAAGCACATGTGTTTTCAACAACTGATGGTTACTCCTTGGATGTATTTGTGGTGGATGGATGGCCTATTGAGGAAACTGATGGCTTGTACGAAGCTATGGAAAAAGCAGTGGCTAGATATGAGGGATCGTGGTCTGGGTCTTCACATTCTCATCCAGTGGTCAAGAAAACATTAGACGCCCAGGTAAAATCAGCAGATTGGGAAATAGATAGACGGTTACTGAAGATAGGTGAAAGAATTGCATCAGGATCTTGTGGTGATTTGTACCATGGATTTTATCTTGGTCAAGATGTAGCTGTCAAGATATTAAGGTCTGAAGACCTAAATGCTGATTTAGAGGATGAGTTCAATCAAGAAGTGGCTATTCTCAGGAAGGTCCAGCACAAAAATGTAGTTCGTTTTGTAGGTGCTTGTACAAGCTCCCCACATTTGTGTATTGTAACAGAGTATATGCCAGGAGGGAGTCTTTATGATTACTTGCACAAGAATCATTGCGTGCTGAAGCTCTCGCAACTGCTGAAGTTTGCTATTGATGTTTGTGAAGGAATGGAGTACTTACATTTAAATAACATTATTCATAGAGACTTGAAGACAGCAAATCTGCTAATGGACACTCAACAGGTTGTAAAGGTGGCAGATTTTGGAGTTGCACGATACCAGAGTCAAGGAGTAATGACAGCAGAAACTGGAACATACAGATGGATGGCTCCTGAGGTAATAAATCATCTGCCATATGATCAGAAAGCAGATATTTTCAGTTTTGCGATTGTGTTGTGGGAACTAGTAACAGCAAAGGTTCCTTATGATTCCATGACACCATTACAAGCTGCCCTTGGAGTAAGACAGGGACTACGTCCAGATCTTCCCAAAAATGTTCACCCTAAATTGTTGGATTTGATGCAAAGATGTTGGGATGCAGAACCTGTAAATCGGCCTCCATTTACCGAGATAAAAGTTGAACTCAAAAGTCTCCTAGAAGAAGTTGAGCAGTTAATGGGAGCTAATGTAGCTGTGTAG 1650 41.52 MADMDFVEGVGESSSPPRSFAAGFCPAHDVRNDVYTRLVECGHEEAVSNPQFRENLDAHFNRLPPSYGLDVNMEKVEDVLLHQKLLSLAKDPEKCPVYHIRFLEHISTKSDGNDDHVFLDSILLSGSSNEAADRRLPLSHKRTRGNIIDFEACSKLEGLNLDVKKNSKAMDRRPGNIGHVLIHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPIEETDGLYEAMEKAVARYEGSWSGSSHSHPVVKKTLDAQVKSADWEIDRRLLKIGERIASGSCGDLYHGFYLGQDVAVKILRSEDLNADLEDEFNQEVAILRKVQHKNVVRFVGACTSSPHLCIVTEYMPGGSLYDYLHKNHCVLKLSQLLKFAIDVCEGMEYLHLNNIIHRDLKTANLLMDTQQVVKVADFGVARYQSQGVMTAETGTYRWMAPEVINHLPYDQKADIFSFAIVLWELVTAKVPYDSMTPLQAALGVRQGLRPDLPKNVHPKLLDLMQRCWDAEPVNRPPFTEIKVELKSLLEEVEQLMGANVAV* 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7286151 7299778 + Chy3G055050.1 Chy03g00525 222686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00525 549 ProSiteProfiles Protein kinase domain profile. 285 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00525 549 Gene3D Transferase(Phosphotransferase) domain 1 363 546 - -
Chy03g00525 549 CDD STKc_MAP3K-like 291 528 - -
Chy03g00525 549 Pfam Protein tyrosine and serine/threonine kinase 285 531 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 15 542 - -
Chy03g00525 549 Gene3D Phosphorylase Kinase; domain 1 272 362 - -
Chy03g00525 549 SUPERFAMILY ACT-like 183 253 IPR045865 -
Chy03g00525 549 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 15 542 - -
Chy03g00525 549 SMART serkin_6 285 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00525 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Chy03g00525 549 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 PRINTS Tyrosine kinase catalytic domain signature 460 482 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 PRINTS Tyrosine kinase catalytic domain signature 503 525 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 PRINTS Tyrosine kinase catalytic domain signature 441 451 IPR001245 GO:0004672|GO:0006468
Chy03g00525 549 ProSiteProfiles ACT domain profile. 184 258 IPR002912 -
Chy03g00525 549 SUPERFAMILY Protein kinase-like (PK-like) 267 536 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00525 Chy-Chr3:7286151 Chy06g02262 Chy-Chr6:26614440 3.32E-172 dispersed
Chy03g00525 Chy-Chr3:7286151 Chy02g00294 Chy-Chr2:1918726 4.49E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71125 PF07714 PK_Tyr_Ser-Thr 2.50E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00525 - - csv:101216231 1075.08