Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00579 ATGGTAACATCAGGGCCACCCACTCCTATGGGTGGTGGTGCACAGTCTGTTTCGCCCTCACTTCTACGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTATGCTTCCTTCACAGGCAGCGTTTTCTTCACTTGTATCACCTCGGAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGTAATAACCACCCTGGTGCTGAACCGGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATTCTTCATCGTCATTTGTAGCATCAAATATGGCAAACCCCGTTTCATCTGTCCAAGGGCAGAATCCACAATTTTCTAACCGTTCTAGCAACCAGTTGCTATCAGATCAGCAGCAGTCGCAACAACTGGAACCCCAGAATTTCCAACATAGTCAACAGTCGATGGAGCAGTTTTCTGCACTTCAGAGCAATCAACAACCGCAATTTCAAGCAATTCGAGGGTTGCCTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGACTAGCAATGATCAACATGGACAGCAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGACTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCAGACCAGTCATTATTTCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAACAACAGCATCAGCATCCGCATCAACAGCAACAGCAATCACAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGTAGCGGCTGCCCAAATTAATCTAATGCATCAACAAAGGATTTTGCAATTGCAACAACATCAACAACTCTTAAAAAGTATGCCTCCTCAACGGCCACAATTACAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGACGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTTTCCATGTATGGAAGTGGACGACAAACAACAGGAGTGTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCAACTGCTGAGGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATCGTCTTGGATTATGCAAAAGCAATCCAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATCGTTTTTTCTCCAGACCTTAAGATATGTTCTTGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTGCTGATACCTCAGGTCAGTCACCTTGGAGCAGCAGCTCAAAAGTTCCAGTCTGCCATTCAAAACACATCATCCAATTTATCAACGCCTGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACAAGTTCATCATCAGGGGTTACAAATCAAGCTCCAATTTCTGATGAACAGCAGCAACAACAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGCAGTACAGCAGCTTACAGCTAGCAATGGTGTGTCCAGTGTAAATAATACCGCCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGCTGGCCTTCTTCACCAGAATTCTATGAACTCGAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATTCCATCACCTGGTTCTTCCAGTACAGTTCCACCTACGCAACCGAACCCTTCTACATTCCAGCCACCAACTCCCTCATCATCCAACAGTCTTTCACAACCATCGCATGCAGCTGCAAAGAATCCCAATCAAATGAGTGCGGCTAATTCTCCGGCAAATATCTCGATGCAGCAACAACCTTCCTTGTCTGGAGATGCTGATCCTAGTGAAACACAGTCCTCCGTGCAAAAGATCCTACAAGAGATGATGATGAATAATCAAATGAATGGGCCAAATAGTCTAGTTGGTGTCGGTTCCGTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGCAATTGTATAGGGGGAAATGGAGCGGCAAATGGTGGCTCAGGGATGGGAGGAGGTGGATACGGATCAATGGGGAGCGGGCTAGGGCAGCCTGCGATGATTAACGGACTGCGGACTGCAATGGGGAATAACACCATTATGAATAGACGCATAGGAATGGCATCGCTCGCTCTAGAACAAAGCATGAATGGTCAACCACAGGATATGGGAAACCAGCTTCTTGGTGGACTAGGGGCTGTAAATGGGTATAGTAATCTCCAATTTGACTGGAAGCCATCCCCATGA 2745 45.03 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGMLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGNNHPGAEPDPLSGVGNGMSFNNSSSSFVASNMANPVSSVQGQNPQFSNRSSNQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQPQFQAIRGLPGVGPVKLEPQVTSNDQHGQQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQQQQQQQHQHPHQQQQQSQQFLHMSRQSSQVAAAQINLMHQQRILQLQQHQQLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKFQSAIQNTSSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGVTNQAPISDEQQQQQSSIAQHSNNNQSSVQASAVQQLTASNGVSSVNNTANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSSVQIPSPGSSSTVPPTQPNPSTFQPPTPSSSNSLSQPSHAAAKNPNQMSAANSPANISMQQQPSLSGDADPSETQSSVQKILQEMMMNNQMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCIGGNGAANGGSGMGGGGYGSMGSGLGQPAMINGLRTAMGNNTIMNRRIGMASLALEQSMNGQPQDMGNQLLGGLGAVNGYSNLQFDWKPSP* 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8283731 8290612 - Chy3G055590.1 Chy03g00579 222740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00579 914 MobiDBLite consensus disorder prediction 69 103 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 708 722 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 599 642 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 191 208 - -
Chy03g00579 914 Pfam LIM-domain binding protein 342 596 IPR029005 -
Chy03g00579 914 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 913 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 120 208 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 234 277 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 681 774 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 592 642 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 681 707 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 236 277 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 1 21 - -
Chy03g00579 914 PANTHER LIM DOMAIN-BINDING PROTEIN 1 913 IPR029005 -
Chy03g00579 914 MobiDBLite consensus disorder prediction 723 774 - -
Chy03g00579 914 MobiDBLite consensus disorder prediction 120 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00579 Chy-Chr3:8283731 Chy03g00834 Chy-Chr3:11531633 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00579 - - csv:101218018 1502.26