Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy03g00614 | ATGCCTTGCTTTTCTTCTTGTATTTCTCGTACTCAAGATGGGAGCCGGGTCGAAACTGATAGTCGTATTCGATTTGAATCCCGCCATTCTGCTAATTCCTCAGGTACATGGAGGGGAAAAGAAGGTGAGAGCAAGCATGAAAGCTGTCCGAAGAGGAGCGCAGCTGCTCGTAGTTTTACGTTCCGTGAACTCGCCATGGCTACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGAGAGGGTGGTTTTGGACGTGTATACAAAGGACGTTTGGAATCAGGACAGATTGTCGCAGTTAAACAGCTTAATCGTGATGGGCTTCAAGGCTTTCAGGAATTTATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCTAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTTCATGCCTATGGGAAGCCTGGAAGATCATCTTTTTGATATAGGTACTGACAAAAAGCCTTTGAGTTGGAATACAAGGATGAAGATTGCAGTTGCCGCTGCCCGAGGCATTGAGTATCTCCACTGCAAAGCAAATCCACCAGTCATATACCGTGACTTGAAATCAGCTAATATCTTATTGGACAATGACTTTAATCCTAAGCTTTCAGATTTCGGCCTGGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACTAGAATAATGGGAACGTATGGATATTGTGCTCCAGAGTACGCCATGAGTGGAAAATTAACCGTTAAATCTGATATTTACAGCTTTGGTGTTGTTCTACTTGAGCTTATTACAGGGCGCAAGGTAATTGATACAAAAAGGAAACCGGGAGAGCAGAACCTAGTTGTTTGGTCCCGTCCTATACTTGGGGACCGGAGAAGGGTTTTGGAACTAGTTGATCCCCTGTTGGAAGGACACTTCCCTCTTCGTTGTTTGCAACACGCAGTTGCAATTACTGCAATGTGTCTTCAGGAACAACCATCGTTCCGCCCTCTTATTACTGATATTGTTGTAGCACTCGAGTATTTGGCTTCTCAAAGTAATTTACGAGAAGTACGCTGTCGTAGGTTTAACAATTCATCACAAATATCGCCCCCACAACAGAATAAAGACACCCATGCCCAGGAATCAGATCCTTAA | 1152 | 43.75 | MPCFSSCISRTQDGSRVETDSRIRFESRHSANSSGTWRGKEGESKHESCPKRSAAARSFTFRELAMATRGFKEVNLLGEGGFGRVYKGRLESGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEFMPMGSLEDHLFDIGTDKKPLSWNTRMKIAVAAARGIEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRIMGTYGYCAPEYAMSGKLTVKSDIYSFGVVLLELITGRKVIDTKRKPGEQNLVVWSRPILGDRRRVLELVDPLLEGHFPLRCLQHAVAITAMCLQEQPSFRPLITDIVVALEYLASQSNLREVRCRRFNNSSQISPPQQNKDTHAQESDP* | 384 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 8712499 | 8715603 | + | Chy3G055940.1 | Chy03g00614 | 222775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy03g00614 | 383 | MobiDBLite | consensus disorder prediction | 362 | 376 | - | - | |
Chy03g00614 | 383 | ProSiteProfiles | Protein kinase domain profile. | 71 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy03g00614 | 383 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 345 | IPR011009 | - | |
Chy03g00614 | 383 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 146 | - | - | |
Chy03g00614 | 383 | PANTHER | OS07G0668900 PROTEIN | 25 | 369 | - | - | |
Chy03g00614 | 383 | MobiDBLite | consensus disorder prediction | 27 | 51 | - | - | |
Chy03g00614 | 383 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Chy03g00614 | 383 | SMART | serkin_6 | 71 | 347 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy03g00614 | 383 | Pfam | Protein kinase domain | 72 | 341 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy03g00614 | 383 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 99 | IPR017441 | GO:0005524 | |
Chy03g00614 | 383 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 367 | - | - | |
Chy03g00614 | 383 | MobiDBLite | consensus disorder prediction | 362 | 383 | - | - | |
Chy03g00614 | 383 | CDD | STKc_IRAK | 77 | 345 | - | - | |
Chy03g00614 | 383 | PANTHER | OS07G0668900 PROTEIN | 25 | 369 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g00614 | Chy-Chr3:8712499 | Chy07g00395 | Chy-Chr7:3164790 | 0 | dispersed | |
Chy03g00614 | Chy-Chr3:8712499 | Chy10g00613 | Chy-Chr10:12711144 | 1.06E-162 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71128 | PF00069 | Pkinase | 1.40E-47 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy03g00614 | - | - | csv:101217131 | 764.992 |