Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00614 ATGCCTTGCTTTTCTTCTTGTATTTCTCGTACTCAAGATGGGAGCCGGGTCGAAACTGATAGTCGTATTCGATTTGAATCCCGCCATTCTGCTAATTCCTCAGGTACATGGAGGGGAAAAGAAGGTGAGAGCAAGCATGAAAGCTGTCCGAAGAGGAGCGCAGCTGCTCGTAGTTTTACGTTCCGTGAACTCGCCATGGCTACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGAGAGGGTGGTTTTGGACGTGTATACAAAGGACGTTTGGAATCAGGACAGATTGTCGCAGTTAAACAGCTTAATCGTGATGGGCTTCAAGGCTTTCAGGAATTTATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCTAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTTCATGCCTATGGGAAGCCTGGAAGATCATCTTTTTGATATAGGTACTGACAAAAAGCCTTTGAGTTGGAATACAAGGATGAAGATTGCAGTTGCCGCTGCCCGAGGCATTGAGTATCTCCACTGCAAAGCAAATCCACCAGTCATATACCGTGACTTGAAATCAGCTAATATCTTATTGGACAATGACTTTAATCCTAAGCTTTCAGATTTCGGCCTGGCTAAACTGGGACCTGTTGGTGACAATACTCATGTTTCAACTAGAATAATGGGAACGTATGGATATTGTGCTCCAGAGTACGCCATGAGTGGAAAATTAACCGTTAAATCTGATATTTACAGCTTTGGTGTTGTTCTACTTGAGCTTATTACAGGGCGCAAGGTAATTGATACAAAAAGGAAACCGGGAGAGCAGAACCTAGTTGTTTGGTCCCGTCCTATACTTGGGGACCGGAGAAGGGTTTTGGAACTAGTTGATCCCCTGTTGGAAGGACACTTCCCTCTTCGTTGTTTGCAACACGCAGTTGCAATTACTGCAATGTGTCTTCAGGAACAACCATCGTTCCGCCCTCTTATTACTGATATTGTTGTAGCACTCGAGTATTTGGCTTCTCAAAGTAATTTACGAGAAGTACGCTGTCGTAGGTTTAACAATTCATCACAAATATCGCCCCCACAACAGAATAAAGACACCCATGCCCAGGAATCAGATCCTTAA 1152 43.75 MPCFSSCISRTQDGSRVETDSRIRFESRHSANSSGTWRGKEGESKHESCPKRSAAARSFTFRELAMATRGFKEVNLLGEGGFGRVYKGRLESGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEFMPMGSLEDHLFDIGTDKKPLSWNTRMKIAVAAARGIEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRIMGTYGYCAPEYAMSGKLTVKSDIYSFGVVLLELITGRKVIDTKRKPGEQNLVVWSRPILGDRRRVLELVDPLLEGHFPLRCLQHAVAITAMCLQEQPSFRPLITDIVVALEYLASQSNLREVRCRRFNNSSQISPPQQNKDTHAQESDP* 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8712499 8715603 + Chy3G055940.1 Chy03g00614 222775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00614 383 MobiDBLite consensus disorder prediction 362 376 - -
Chy03g00614 383 ProSiteProfiles Protein kinase domain profile. 71 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00614 383 SUPERFAMILY Protein kinase-like (PK-like) 51 345 IPR011009 -
Chy03g00614 383 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Chy03g00614 383 PANTHER OS07G0668900 PROTEIN 25 369 - -
Chy03g00614 383 MobiDBLite consensus disorder prediction 27 51 - -
Chy03g00614 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Chy03g00614 383 SMART serkin_6 71 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00614 383 Pfam Protein kinase domain 72 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00614 383 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Chy03g00614 383 Gene3D Transferase(Phosphotransferase) domain 1 147 367 - -
Chy03g00614 383 MobiDBLite consensus disorder prediction 362 383 - -
Chy03g00614 383 CDD STKc_IRAK 77 345 - -
Chy03g00614 383 PANTHER OS07G0668900 PROTEIN 25 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00614 Chy-Chr3:8712499 Chy07g00395 Chy-Chr7:3164790 0 dispersed
Chy03g00614 Chy-Chr3:8712499 Chy10g00613 Chy-Chr10:12711144 1.06E-162 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71128 PF00069 Pkinase 1.40E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00614 - - csv:101217131 764.992