Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00663 ATGGACGGCGGTGCTCCGTACAATCCACGTACTGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTAATCAAAGCTCTCACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTTTGCCTTTATGGATTTCCGAGTGAGCAATGGGAAGTCAATTTACCCGCGGAAGAGGTGCCACCAGAGCTCCCAGAACCTGCACTTGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAGGACTGGCTATCCTTGGTTGCGGTTCATAGTGATGTTTGGCTGCTCTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGGTTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAACGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATTCAAAGGATATCACTATTCTACGTGCCGTTCGGGTTACAAGTGCAACAAGGAGAGAGTTGTTAACAAACTACACCCTATCAACTATTGTTGCATTTAATAGTTATAGTGTAAAGATTCGAATTGAGGAAGCTGGAGAGATATTTTATTGCCTTCTAAAATGCTTCCACATCTTTTCCTCGACTGGAGAATCCTTTGCATCCACAAATGTCCTTAACAACATCTATTAA 714 40.62 MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKDITILRAVRVTSATRRELLTNYTLSTIVAFNSYSVKIRIEEAGEIFYCLLKCFHIFSSTGESFASTNVLNNIY* 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9234183 9240496 + Chy3G056430.1 Chy03g00663 222824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00663 237 PANTHER CPG BINDING PROTEIN 4 166 IPR045104 GO:0006355|GO:0042393
Chy03g00663 237 Pfam Alfin 11 139 IPR021998 GO:0006355|GO:0042393
Chy03g00663 237 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 4 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00663 Chy-Chr3:9234183 Chy06g01612 Chy-Chr6:18609086 2.71E-76 dispersed
Chy03g00663 Chy-Chr3:9234183 Chy10g00423 Chy-Chr10:10085746 6.37E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00663 - - csv:101208889 316.235