Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00673 ATGGAGGAAATGTCCCCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACTCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTATCTGATTCTGTGACTAAGGCTTCTGATGACCTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATTACTGCAGTTTCGGTTATGAATGACAAGTGCGAAGGAGTTCCATTGTCGGTTGTGTTATCTCAAAATAATAGCAATTGGGGTGTGGCAGACGAGACGATATCCCATGGAAGTGAGGAAGATGATTCTTTATCATTAGAGGGCGATCACATTTACGATAGCTCTTGTTCGCATTCAGTGATTAGTGAGACTAGCAGCATTTGTGGTGATGAATTTTTAGGTTCTGAGGCGTCTTCTTTTGATGCATTTGATTCTATCATTAATGCTAAGGACATTAGCAGCGTTGAGATTGCAGCTAAAGCCAATATTGAAGAGACTAATGTTGAAAGTCTCGAGACTCAGATTGCGAGTTCTTCTTCCGCAGCAGCTAGCCTTGAAGAAGATGTTGGAGGTGGGATAGGTACTACAGCATGTGATAACATGGTCCTTCAGCTGCCTCTTGAGAAAAAGGCAAGCGAACCAGTTGGTCGAAGTGTTTTTGAGGTAGATTGTGTACCTCTTTGGGGATATACATCGGTCTGTGGAAGAAGACCTGAGATGGAAGATGCAGTGGCAACCGTACCTAGGTTTTCAGAACTTCCTGTCCAAATGCTTGTTGGCGACCGAGTTCTTGATGGCTCAAACAAGGCTATAGCTCACCAAACCGTTCATTTTTTTGGGGTTTACGATGGTCATGGTGGCTCTCAGGTCGCAAATTTTTGTCGTGAACGTATGCACTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCACGATATAGCTGTTGGCAACATGAAGGATAATTGCCAAGAGCTATGGAGAAAGGCATTCACCAACTGTTTTCTAAAAGTTGATGCAGAAATTGGAGGAGGACCCGGTGTTGAGCCTGTTGCGCCAGAAACTGTTGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCAAGAGCAGTTCTTTGTCGTGGGAAGGAGCCAATGGCATTGTCTGTGGATCATAAACCAAATAGAGCAGATGAATATGAAAGGATTGAGGCTTCTGGAGGAAAGGTCATACAGTGGAACGGACACCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATTGGTGATAGATACTTGAAACCATGGATCATCCCAGAGCCAGAAGTAATGTTCGTCCCTCGAGCGAAAGATGACGAATGCCTCGTTCTAGCCAGTGATGGTTTATGGGACGTGATGACGAATGAAGAAGTATGTGACCTGGCTCGAAGACGAATCCTACTCTGGCACAAGAAGAATGGTGTCAGTTTACCTTCTGAGAGGGGGTTGGGGATCGATCCTGCAGCCCAAGCAGCCGCCGAATACCTCTCAAACCGAGCTCTCCAAAAGGGCAGCAAAGACAACATCACGGTAATCGTGATTGATTTAAAAGCTCAAAGGAAGTTCAAGACAAAATCATAA 1662 44.83 MEEMSPAVVVPFRVGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDLTEVGSDDCKSSNGEEEVGITAVSVMNDKCEGVPLSVVLSQNNSNWGVADETISHGSEEDDSLSLEGDHIYDSSCSHSVISETSSICGDEFLGSEASSFDAFDSIINAKDISSVEIAAKANIEETNVESLETQIASSSSAAASLEEDVGGGIGTTACDNMVLQLPLEKKASEPVGRSVFEVDCVPLWGYTSVCGRRPEMEDAVATVPRFSELPVQMLVGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKHDIAVGNMKDNCQELWRKAFTNCFLKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRADEYERIEASGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFVPRAKDDECLVLASDGLWDVMTNEEVCDLARRRILLWHKKNGVSLPSERGLGIDPAAQAAAEYLSNRALQKGSKDNITVIVIDLKAQRKFKTKS* 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9296848 9300293 - Chy3G056530.1 Chy03g00673 222834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00673 553 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 120 552 - -
Chy03g00673 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Chy03g00673 553 CDD PP2Cc 241 543 IPR001932 -
Chy03g00673 553 Coils Coil 180 200 - -
Chy03g00673 553 Pfam Protein phosphatase 2C 267 536 IPR001932 -
Chy03g00673 553 SMART PP2C_4 229 541 IPR001932 -
Chy03g00673 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Chy03g00673 553 PANTHER ALPHABET, ISOFORM E-RELATED 120 552 - -
Chy03g00673 553 Gene3D - 226 553 IPR036457 -
Chy03g00673 553 SUPERFAMILY PP2C-like 236 544 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00673 Chy-Chr3:9296848 Chy04g00664 Chy-Chr4:7650706 0 dispersed
Chy03g00673 Chy-Chr3:9296848 Chy12g00232 Chy-Chr12:2656877 6.11E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00673 K14497 - csv:101207918 1079.32