Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00674 ATGTCTCCCTCCTCGTATCCACCAGAAGATGGGATTCCCTTGAACACCACGGCGGTCGCCATTGATAAGGATAAAAACAGCCATCACGCTGTACGATGGGCTATTGATCATTTGGTCATTAACAATCCACTTATCATTCTCATTCATGTTAGGCATAAAGCTAATCAGGGTGCGAGCGATTCTGAAAATGGCGAAACTGATGCCCAGCAGCTATTTGTTCCTTACCGTGGATATTGTGCTCGTAAAGGGGTTCAGTTGAAGGAGGTTGTTCTTGACGATCCTGATATTTCCAAAGCGCTTGTTGACTACGTTCATAAGAATTGCATCAACAGTTTTGTAGTTGGAGCTTCAACAAGAAGTGCTTTAGCAAGGAAATTTAAAGCCCCCGATGTGCCAACCAGCATAATAAAAACTGCCCCAGAATTTTGTTCTGTTTATGTAATATCAAAAGCGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCATGCCACCAAGACAACCGTCGCCGCTTGGAGTTCAGCCAAATGGTCAATCAGACAGCAGCAGCGAACCAGAAAATGGAGCCAAATGCCAAGTAGCAAAGGAAGGATGGAAAAGTGCTGGTACAGAGAGAATGCTCGCTGAAAGGAATGGCGGTGGAAAACAAGCAAAAGCATTGACCCGCGAGAGGCCAAAAACTTCTCCGACTAATATATCTCTGGAAAACATAGAGGTTCCAAATCGAGGGTCTAGGTCTTCATTTAGTCGTGATTCGATATCTGATGACAATATGATGACTGCACAAATGGCTTTTGGTTCAATGGATGTGACTGCTCAAAATTTAGATTTTAGTGCTAACTCAAATTTGTCAATGGACTCTGCTGCCGGACAATCTACTCGGGAGCTAGAGGCTGAGATGAAAAGATTGAAGTTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGCAAAGAGGCAATCTCAGCCAAGAACAAGGCAAGAGAACTAAGTCAGTGGAAGCAGGATGAGGCACGTAAGTTTGAGGAAGTCAGGCTAGCTGAAGAGGCTGCTCTTGCTATTGCCGAGATTGAAAAAGCCAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCAGAAATGAAGGCCAGACGAGAGGCAGAAGAGAAAAAACGAGCATTGAATGCTCTAGCTCAGAACGACGTCCGATATAGAAAATACACTATAGAGGAGATTGAGGAATCTACTGAAAGGTTCTCTGAAAAATTGAAGATTGGAGAAGGTGGATACGGTCCCGTTTATGGTGGCAAACTTGACCATACAGCTGTTGCGATTAAAGTTTTAAGACCTGACGCTGCTCAAGGACGGAAGCAATTCCAACAAGAGGTGGAGGTTCTATGTTGTATTAGACATCCAAACATGGTCCTTCTTCTTGGAGCATGCCCCGAGTATGGTTGCTTGGTATATGAGTACATGCATAATGGAAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATAGCCCTCCATTATCATGGAGACGACGATTCAAAATAGCTGCTGAAATTGCAACCGCACTCCTTTTTCTTCACCAAGCAAAGCCAGAACCGCTTGTGCACAGAGACCTTAAACCAGCTAACATTCTCCTGGACCGCAATTTCGTGAGCAAAATTAGTGATGTTGGCCTGGCCCGGTTAGTCCCACCTTCTGTAGCTGATCAAGTCACACAATATCATCTGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCTGAGTACCAACAAACAGGGAAGTTGACGACAAAATCAGATATTTACTCGTTTGGAATAATGTTACTTCAAATTATTACTGCCAAACCTCCAATGGGACTGGCTCACCATGTGCAAAGGGCTATTGAGAAAGATAGGTTTGATGAGATGCTTGATCCGACAATTTCAGATTGTCCATTGGAGGAGGCCACAAATTTTGCAAAGTTGGCATTGAAGTGCGCTGAACTGAGGAAGAGAGACAGGCCTGATCTTGGAACGGTTATAGTTCCAGAGCTCAACAGGTTAAGAGATATTGGGAGGAGTTCTGACAAACGTGAAAACCGGAATCACTATTCACGCTCTTCTGCATCAAGTTCCAGTTCGAAGCCGCAGTCATCAAATGAGTCGTTTGTAATTGTAATGCATCGCTTCTTGTTAGGGGCAACCCTTGTGAAATATGTCCTTATTGAAACAGGGAATCTCCAGGAAGGAATTGAGGAGCCCAGATTGAGAAGAAAACATCCAGTTCAAGCTTCTAGCTTTTACATAAACTCTATTGCCATCATAAAGAAAATTGGAATAAAGATGTGTTATCAAACAGTGTGTTATTTGAACGATTAA 2409 43.79 MSPSSYPPEDGIPLNTTAVAIDKDKNSHHAVRWAIDHLVINNPLIILIHVRHKANQGASDSENGETDAQQLFVPYRGYCARKGVQLKEVVLDDPDISKALVDYVHKNCINSFVVGASTRSALARKFKAPDVPTSIIKTAPEFCSVYVISKAKIISARAALRPVANTAMPPRQPSPLGVQPNGQSDSSSEPENGAKCQVAKEGWKSAGTERMLAERNGGGKQAKALTRERPKTSPTNISLENIEVPNRGSRSSFSRDSISDDNMMTAQMAFGSMDVTAQNLDFSANSNLSMDSAAGQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEIEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREAEEKKRALNALAQNDVRYRKYTIEEIEESTERFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNSPPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKDRFDEMLDPTISDCPLEEATNFAKLALKCAELRKRDRPDLGTVIVPELNRLRDIGRSSDKRENRNHYSRSSASSSSSKPQSSNESFVIVMHRFLLGATLVKYVLIETGNLQEGIEEPRLRRKHPVQASSFYINSIAIIKKIGIKMCYQTVCYLND* 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9312755 9318557 + Chy3G056540.1 Chy03g00674 222835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00674 802 SUPERFAMILY Protein kinase-like (PK-like) 415 690 IPR011009 -
Chy03g00674 802 Coils Coil 358 413 - -
Chy03g00674 802 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 147 - -
Chy03g00674 802 MobiDBLite consensus disorder prediction 177 193 - -
Chy03g00674 802 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 727 - -
Chy03g00674 802 ProSiteProfiles Protein kinase domain profile. 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00674 802 PANTHER OS02G0152300 PROTEIN 16 727 - -
Chy03g00674 802 MobiDBLite consensus disorder prediction 702 728 - -
Chy03g00674 802 Gene3D HUPs 10 148 IPR014729 -
Chy03g00674 802 Gene3D Transferase(Phosphotransferase) domain 1 505 723 - -
Chy03g00674 802 Coils Coil 298 318 - -
Chy03g00674 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Chy03g00674 802 CDD STKc_IRAK 438 698 - -
Chy03g00674 802 SMART serkin_6 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00674 802 MobiDBLite consensus disorder prediction 166 237 - -
Chy03g00674 802 CDD STK_N 16 150 - -
Chy03g00674 802 Pfam Protein tyrosine and serine/threonine kinase 436 690 IPR001245 GO:0004672|GO:0006468
Chy03g00674 802 Gene3D Phosphorylase Kinase; domain 1 401 504 - -
Chy03g00674 802 Pfam Universal stress protein family 19 145 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02190 Chy-Chr1:26459732 Chy03g00674 Chy-Chr3:9312755 0 dispersed
Chy03g00674 Chy-Chr3:9312755 Chy03g01203 Chy-Chr3:15140357 1.58E-29 dispersed
Chy03g00674 Chy-Chr3:9312755 Chy04g00284 Chy-Chr4:2522498 3.57E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71131 PF07714 PK_Tyr_Ser-Thr 1.00E-41 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00674 - - csv:101203326 1309.28