Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00679 ATGTCCAAAGAGCCCCCACAACAATTAAAGAAGACCTACTTACTGCAGGGCTATTTTCGTCATATAAATTTTCCATCCTCCTCTTCCCACCATTACAAATTCCCAAAATTTCATCGTTCAATCACAATAATCTGCTCAGATCGAAAGCCATTTCTCAGCCATCGGTTCATTCAGATTCCAGATATGGAGGAAGAGGAGTCCGGCGAGGCTATCCGGCCGGAATTTCCGACGGGACGAGTGAAGAAGATAATGAAGCTCGACAAGGACATTGGCAAAGTGAATTCAGAAGCCTTGTTTCTAGTTTCATGCGCCACCGAACTCTTCCTTAAGCTTCTAGCTGAAAAATCTGCAGAATCCGCCGCTGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATTCGAATGGCCGTCAAAAGGCATCGCTCGATCAGTGATTTTCTTCTCGATTCGCTTCCTCTTCCGTCTCAGCCGTCGGATGCGCCGGCGAAGGACGAGAATCGCACTCGCGCTGTTGTTGATAAAGTGGCTCCTGAAGGAACGCGTCGAATCGATGATTTCTTTCGTCGGTCAACTAAGACAAAGTCGGCGGAGACCGAGTCATAG 603 47.76 MSKEPPQQLKKTYLLQGYFRHINFPSSSSHHYKFPKFHRSITIICSDRKPFLSHRFIQIPDMEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAAEKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTRRIDDFFRRSTKTKSAETES* 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9359449 9360051 + Chy3G056590.1 Chy03g00679 222840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00679 200 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 137 IPR003958 -
Chy03g00679 200 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 54 191 - -
Chy03g00679 200 SUPERFAMILY Histone-fold 73 152 IPR009072 GO:0046982
Chy03g00679 200 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 54 191 - -
Chy03g00679 200 Gene3D Histone, subunit A 45 152 IPR009072 GO:0046982
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00679 Chy-Chr3:9359449 Chy10g00706 Chy-Chr10:13408346 3.90E-10 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17680 PF00808 CBFD_NFYB_HMF 9.60E-20 CL0012 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00679 - - csv:101207423 231.106