Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00689 ATGGACGACGGAGGAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTACCTCCACCGCAGCATGACCCGGCGGCGCAACAGCAACATCAGCATCAACCGCCGTCGATGGGGATGGAAAATATTCCGGCCACTTTGAGCCATGGAGGGAGATTTATTCAGTATAATATATTTGGTAACATCTTTGAAGTTACGGCCAAGTACAAGCCTCCTATTATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCTGAGACGAACGAGCATGTGGCGATTAAGAAGATTGCTAATGCGTTTGATAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCGATTAGGGATATCATACCTCCGCCTCTAAGGGAAATATTTAATGATGTTTATATCGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTATTTCCTGTACCAGATACTTCGTGGATTGAAGTACATACATTCGGCTAATGTTCTGCACAGAGATTTGAAACCTTCCAATCTTCTATTAAATGCGAACTGTGACCTGAAAATATGCGATTTCGGACTTGCTCGTGTTACTTCTGAAACTGACTTCATGACAGAATATGTGGTTACTAGATGGTACCGTGCACCAGAGCTCTTACTTAATTCATCTGATTACACCGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTAATGGATCGGAAGCCCTTGTTTCCTGGTCGAGATCACGTCCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACTCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAATTACCTCATTACCATCGTCAATCATTCACCGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGACGCTCTAGCTCATCCTTATTTGACTTCATTACACGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAACAGCTGATCTATCAAGAGGCGCTTGCATTTAACCCCGAGTATCATCACCAATAA 1218 44.5 MDDGGASQPDDTVMSEAASVPPPQHDPAAQQQHQHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLREIFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKQLIYQEALAFNPEYHHQ* 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9434641 9446341 + Chy3G056690.1 Chy03g00689 222850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00689 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Chy03g00689 405 CDD STKc_TEY_MAPK 65 400 - -
Chy03g00689 405 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00689 405 Pfam Protein kinase domain 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00689 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 34 403 - -
Chy03g00689 405 SMART serkin_6 72 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g00689 405 MobiDBLite consensus disorder prediction 25 43 - -
Chy03g00689 405 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 34 403 - -
Chy03g00689 405 SUPERFAMILY Protein kinase-like (PK-like) 77 365 IPR011009 -
Chy03g00689 405 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
Chy03g00689 405 MobiDBLite consensus disorder prediction 1 46 - -
Chy03g00689 405 Gene3D Transferase(Phosphotransferase) domain 1 156 384 - -
Chy03g00689 405 ProSitePatterns MAP kinase signature. 107 210 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy03g00689 405 Gene3D Phosphorylase Kinase; domain 1 55 394 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02318 Chy-Chr2:27194904 Chy03g00689 Chy-Chr3:9434641 8.23E-116 dispersed
Chy03g00689 Chy-Chr3:9434641 Chy09g01256 Chy-Chr9:14581312 0 dispersed
Chy11g02015 Chy-Chr11:26003592 Chy03g00689 Chy-Chr3:9434641 6.95E-54 dispersed
Chy12g00121 Chy-Chr12:1329285 Chy03g00689 Chy-Chr3:9434641 6.24E-17 dispersed
Chy12g01405 Chy-Chr12:18170850 Chy03g00689 Chy-Chr3:9434641 3.28E-111 dispersed
Chy03g00689 Chy-Chr3:9434641 Chy11g01662 Chy-Chr11:23088308 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71132 PF00069 Pkinase 4.10E-73 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00689 K14512 - csv:101204301 798.119