Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00721 ATGTCATCACACACCTTACTTCTCTATTTCCCCATTTCCATTTCCCAAAGCTTCGATGCTCTTCTCCTTTCCCTTCTCCTCCTCTCCCTTTTCACCTTCTTCCTCCACCCTGGCGGCTTCGCTTGGGCCATTTCCAAGTGCAAAACCACCGCTTCCTCCGCCATCCCCGGCCCTTCTGGCCTCCCATTCATCGGCCTCCTCCACATCTTCACTCTCTCTACTCCTCACAAATCCCTCTCTACTCTCGCCAATCGATTTAAAGCGTACCCATTAATGGCTTTCTCTGTTGGCTTAACTCGCTTTGTGATTTCTAGTAATCCTGATGTTGCTAAAGAAATTCTTAATAGCCCTTCCTTTGCTGATAGACCTGTGAAAGAATCTGCTTATGAACTGCTTTTTCACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGGAGGATTTCTGCTACTTATATGTTCAGTCCCAGGAGAATAGCTGGGTTTGAAGGGTTTAGGAAAGAAGTTGGGTTTAAAATGGTGAGGGAAATTGAGAAATCCATGGTTTTAAAAGGGGATGTTAGAGTTAGGGAGATTCTTCATTTTGGGTCTTTGAATAATGTGATGATGACTGTTTTTGGGAAATGTTATGAGTTTTGTAATGGCGAGAGAGATGGACTTGAGCTGGAGGCGTTGGTTAAAGAAGGGTATGATTTGCTTGGTATTTTTAACTGGAGTGATCACTTTCCTTTGTTGGGGTTATTGGATTTACAAGGTGTGAGGAAAAGATGTAGATGTTTGGCTTCTAAGGTTAATGTATTTGTGGGGAAAATCATTGAGGAACATAGAATGAAGAGGGAAATCAAGGAATTTCATCAAGAAGAACAAGAACATAATAAAGATTTTGTTGATGTTCTGCTTGATTTGGAGAAAGATGACAAACTCTCAGATTCTGATATGATTGCTGTTCTTTGGGAAATGATATTTAGAGGAACTGACACAGTAGCCATACTTCTAGAATGGATTTTAGCAAGAATGGTAATACATCCAGAAATCCAAACTAAAGCACAAAGTGAAATTGATTCAGTAATAGGCAAGAAATGGAGAGCCATTTCAGACAATGATATTCAAAAGCTTCCATATCTTCAAGCCATTGTGAAGGAATGTTTAAGAATGCACCCACCAGGGCCACTTCTATCATGGGCAAGACTAGCGGTAGCGGACGTACACGTCGACGGGAGGGTTATACCGGCCGGGACGACGGCAATGGTGAACATGTGGGCAATAACACATGATGAGAAGGTGTGGAAAGATGCAGAGAAATTTGATCCAAACAGATTCATGGAAGAAGAAATCAGTGTTATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTTTGTCCTGGAAAAGCAATGGGATTGGCTACTGTACATCTCTGGTTGGCTCAGTTGCTTCAAGCTTACAAATGGATGCCTTGTTCTGATGAATCCACTAATGGTGTTGACTTGTCAGAGTGTCTTAAACTCTCAATGGAAATGAAAACTCCATTGGTTTGCAGAGCTGTTCCTAGGCCTGCTTGGTGA 1587 42.34 MSSHTLLLYFPISISQSFDALLLSLLLLSLFTFFLHPGGFAWAISKCKTTASSAIPGPSGLPFIGLLHIFTLSTPHKSLSTLANRFKAYPLMAFSVGLTRFVISSNPDVAKEILNSPSFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATYMFSPRRIAGFEGFRKEVGFKMVREIEKSMVLKGDVRVREILHFGSLNNVMMTVFGKCYEFCNGERDGLELEALVKEGYDLLGIFNWSDHFPLLGLLDLQGVRKRCRCLASKVNVFVGKIIEEHRMKREIKEFHQEEQEHNKDFVDVLLDLEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVIHPEIQTKAQSEIDSVIGKKWRAISDNDIQKLPYLQAIVKECLRMHPPGPLLSWARLAVADVHVDGRVIPAGTTAMVNMWAITHDEKVWKDAEKFDPNRFMEEEISVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQLLQAYKWMPCSDESTNGVDLSECLKLSMEMKTPLVCRAVPRPAW* 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9676446 9678353 - Chy3G057010.1 Chy03g00721 222882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00721 528 PANTHER CYTOCHROME P450 78A5 1 525 - -
Chy03g00721 528 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PANTHER CYTOCHROME P450 78A7-RELATED 1 525 - -
Chy03g00721 528 Pfam Cytochrome P450 56 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Chy03g00721 528 Gene3D Cytochrome P450 43 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 SUPERFAMILY Cytochrome P450 55 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g00721 528 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00721 Chy-Chr3:9676446 Chy04g00765 Chy-Chr4:9753598 1.07E-84 dispersed
Chy10g00785 Chy-Chr10:13895962 Chy03g00721 Chy-Chr3:9676446 0 transposed
Chy11g01721 Chy-Chr11:23606621 Chy03g00721 Chy-Chr3:9676446 9.93E-179 transposed
Chy11g00082 Chy-Chr11:930368 Chy03g00721 Chy-Chr3:9676446 8.85E-169 transposed
Chy12g01486 Chy-Chr12:18753705 Chy03g00721 Chy-Chr3:9676446 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00721 K20619 - csv:101221468 1033.48