Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy03g00750 | ATGGGTTCATGTGATGACCCGGCTGTGATCGGGGAACCGTTTCGTGCCTCTGTTACTCGCCTGGTCAGGTGTTCGAGTCAACCTCTTCCCGAGCATCAGTCGCATCAGGAGATGGCTTCCTTTTCATCTAATTCTCGTGAGGGCCAGATGTTTGAGCCAGATAGGGGGCTGGGAGTGACTACGGCTTCTGTCTGTATGAATGCATCGGACCTTGATACTTCTGGGGAGGATGGGACACTTAGAGGCTTCGAACATGCAGCAGATAGTTTGCTAATGGATAAAAGATTGGATGGTGATTCTGGCGGTAGTGATCCCTGTCTAAACTTGGATAACGAGTATTGCAACGAGGGGAATAAAACATTGAGCTTGGATATGAAAGAGTCTGAAGACGTTGATGGTTTGGTTGATATTTTGGGATGCGATGCTACCATGGAAATGATTTCTTTAACTGAGTCATTAGTAAATTCTGTGAAACCTGAAGAACTTGATAATAATAGTTGTATAATTGATGCTCCTGCAAAATTTGAAAGGGATGATACTGTACAAAATGGTCCTATTTTAGCAGGGACGGGTACTCGTACAGATGACTTAAAATCTTCTTATGTCTGTGAAATTGTTTCTAATTCAGCTTCAGCTGATGGACTGCCAAATGATTTCATACAGAAAAACGAGCTGGAAAATGATGGTGCTGGTTGTTCATTTTCCGAGGTTGCAGATAGGATAACTGAGGCTTCGGTTGAACTAGAAGCAGATATGTTGAATGAGATGTCCCCTTTACAGAGTGGTCAAATACTACCAATACATGTGGGGCAATCAATTGCCAACTGTGATCGGTATGTTTGCCGGATGGACGGGAAGAGCTTAAGTAGCACCTCTGGAGAAACAGTAACTGAAGTTGCTGATATGAACAGCAACCCTGAAGTATGCCTGCAAATGTTGCCTTCACAGGGATGCGATAGGATTGGGGAATGCTTGCAATCTGATGGTTTACCGCTAACTATTCATGCTTCAGAGAATGATTTGTGTGAGGAAAAGCATGACAGTAATTCCTCATCCAAGTACATTCCAGAGGTTGGGGGAGATGATAGTGATGTCTTGACTAACAATAATAGTGATGGTGGACAACATACAGTTCCGGGGATTGGAAATGACCATAATCTGGAGGACGCTACTGTTCAAGTGAACCACAACTGTGTTGAACTACTTGCATCGCCCTTGCCTTCTCAGCTCCCTAATTCTGAGAAAGATGAATTTTATGGAATGTTGAATGGAGCAGATATTCCAATAAAATATATTAGTTCTATTAATTCATGTAGTGTCGGTGATCAAGACAACAATGACATAGAGAAAGTTGGCTGTGTTTCTGAAGTTAAATGTCCTGAAACGGTTATCACGTCTTCTAAGAGGAGTGGCCGAAGGAGAACATCAAGCCAAAAAACTGTGACAAAAAGGGCTTCCAGGAAAACCAAAAAAAAGGTGCCAGAGCCACTGATTTTTGACACTGCAAGAAGGAGGAGAAGCTCTATATCTAGACCTGCTCGTCCCTCACCCTGGGGATCACTGGGCCATATTATTCAGTCATTTGAAGAAATTGATTATGTTCTGGTAAATCAAACCCAGAAGCAAGGAAATGAGAAATCTAAAGGTAATCAAGGAGGTGCCAAGCGGAATAAGAAACAGATAAGTGAAAGTTCACACAGATCAAGAAAAGGGACCCAAGGAAAATCTGCTACTTCAACTTCAACCAATCGTATTCGTCTGAAGGTTAAATTAGGTAAAAATGTGGGTCATAATTTTCTGAACATTGTGGTTCCCGAAATTGTTGATTCATCATTGTCTGCCAAGGGTGTCAATTGCAATTATGGCAATGAATCATATTGGGAAGGTAATATGGAATTCCCTCCATCAACCCTTGGTGTTGATGACCAAAAGGCCGAGGAGGGGCCTTTAAGGAAGATCTTCTGCTACAGCAGGAATCAGGATAAAGAAGATAATTGTCCTGATGCTTCTGTTGTGAATGAACAATGTACTAATAATGATTCAAGTTGCACCATTGGTATAGATAAGTCCTCTGAAAAACATGCAGATGATAATCTCTGTGTTTCCTCCCATTTGGTTGATCCTGTAGCGACAAGTGATACCAGGAGTTTGGATCCTGGAACTTCGCCTGATTCAGAAGTGATAAATTCAGTTTTAGATATTCAAGTCGGAGCAGCACGTCAGGAAATTTTGCAGGACTCAGTTTTGGCATCCTTAGAAGATTTTGCTGCTTCTGGAAATGCTCCCGGTAGTAAGAAAGGTAGGAAGAAGGACAAACCCTCTCGGGCAGTTAGTTATTCTGAGGAACGTGGCACAAGTGTTTCTGCTTGCAGTAACAGGTCCAAGTCATCAAAGAAGCACGGAAGAAGACAGAATGTGGACAATCAACTTAGTTCTGGTGAGACATTTACTTACGCTGATGCAAATGTTTTAAACTACTCTTTAACTGTTAAGGAATTGTCTATGGAGCAAGTGTCTTTGTTGACAGAGATTGAACTTCCTGAAGAGACTTTGAAAGCAGAAGACATTCTCAATGATAAAGAATGTTGCAGAGCAGATGTTGGCAGTGTGTTTCCTGAATCAGAGAATTCAAAAACATTTCTTCCTTCTCAATCCGCAAAGAAGAAACATCCCAAAGGATCTAAATCTATTAAAACTAGCAAAGGCAAGTCAAAGGCTCCTGGCTCAAAAAACAAAATAAAGAATGTTTCAAATGAAAGGGTTTACCAACGGAAGTCTTTTAAAAAGAGTAAAAGCAAGGAGGCTCTATGTGACCGAGTTGTGACTGAAACAGAAAGTCACCAAATCATAGGAAATTGTCTTGTAGACAAGCCTGAGAAAAGCGATAACATTATTGCATCCTCAGTGGCAGTAGATTTGAGTGTGGTACAGGGTGCTGTGAAAGAGCAGTATATGCCTCCTCGCAATGCTTGGGTGCTCTGCGATGACTGTCATAAATGGCGACGCATACCAGCTTCTCTTGTTGATAGTTTAGGACATGCAAGTTGCACATGGACTTGTAAGGACAATGTGGATAAAACTTTTGCTAATTGCTCAATCCCCCAAGAGAAGTCGAATGCAGAGATTAATGCAGAGTTGGAAATATCAGATGAATCTGGGGAAGAAAATGGTTCCAAAAAACGGCTAACTTACAGGGAATTGGAGAGTTTTCATCCAGCAACAGTGACTGCTGTTCCTCAACAGAACAAATTTGCTTCCATTAGCAGCAATCAGTTTTTGCACCGCAGTCGTAAAACCCAGACTATTGATGAGATAATGGTTTGTCACTGCAAACCAGCTTTGGATGGTCGGTTAGGTTGTGGAGATGAATGCTTGAACCGAATGCTCAATATTGAATGTGTACGAGGTACATGTCCTTGTGGGGACCTTTGTTCTAATCAACAGTTCCAGAAGCGTAAGTATGCTAAATTACAGTGGTTGCGATGTGGAAAGAAAGGTTATGGGCTACAGTTGCTTGAGGATATATCAAAAGGACAATTTCTCATTGAGTATGTTGGAGAGGTCCTTGACATGCATGCTTATGAGGCACGCCAAAAGGAATATGCATTGAATGGCCATCGGCATTTTTACTTCATGACACTAAATGGCAGCGAGGTCATAGACGCATGTGGAAAGGGAAATTTGGGGCGTTTCATTAACCACAGTTGTGATCCAAATTGCCGCACGGAGAAGTGGATGGTGAATGGAGAAATCTGCATTGGGCTCTTCGCACTAAGGGATATTAAGAAGGGGGAAGAGGTGACATTTGACTACAATTATGTAAGGGTATTTGGGGCTGCTGCAAAAAAATGTTATTGTGGTTCTTTCCATTGTCGAGGTTATATAGGTGGAGACCCCCTCAATTCTGAGGTCATTATTCAAAGTGATTCAGATGAAGAATTCCCTGAACCTGTGATGCTTCGAGCAGATGGAAGAAGTTTGAATAATAACTTGTCAACTGCAGTTAGTTCAATGGATGTTGCTAAAATGCAATCCTCTGAGCATCTAAAAGGGAATAGGGACAAGAGAGATCAACCTATCAGAATTCCTAGCGAATTGAAGATTTCAGAAGAAAAAGTGGATCCTCTTAAGCTTTCTGCCTCAAAGATTTCAGACGAAAAAGAGGATCCTCTTAAACTTTCTGCAACGAAGATTTCAGAAGAAAAAGAAGATCCTGTTAACCTCTCTGCCTCTACCATTTCACCATTGCACAGTTCACTGGAATTCGAAGACTCGAAGGTAGCATCACCTATTCCAGTGCCAGATATTACCCATCAGACTGAGGATGTGACAAGCCAACCTATTTTTGTTGATCAGACAGAAATATCTCTTTCGGACAATATTCCTGACAAAAATACATGCTCTATTGAGCAGGAGGCAAAGTTATCAGTGGATGACATTGACGCTCGTAAGAAGTCCAAGCTGGATTCTGTTGAAGACAAGCAAGTGTATATAAAATCGCATCCTCGGATGAAAACTTCACGTAAACCAGGTTCCATCAAGAAAGGAAAAGTTAGCTCTGCAGAAAAGATACAAATAACTAACAGGTCCCAGATTTCCTCTGTAAAGCCCAAGCGATTGATTGAAGGTTCTCCGGTTAACCGCTTTGAAGCAGTTGAGGAGAAGCTTAATGAACTTCTGGATGCTGAAGGGGGAATTAGCAAAAGAAAAGATGCCCCTAAAGGGTACTTAAAACTTCTTTTTCTGACTGCTGCATCGGGTGCAAGTGCTAGCGGTGAAGCAATTCAGAGCAATCGGGATCTTTCAATGATCCTTGATGCTCTTTTGAAGACAAAGTCACGATTAGTATTGACTGACATTATAAACAAAAATGGTTTGCGGATGCTGCATAACATAATGAAGCAATATAGAAGTGACTTCAAAAAGATACCTATTCTTCGGAAGCTTTTGAAGGTCCTGGAATACTTGGTGACAAGAGAGATAATCACTTCAGAGCATATCAATGGCGGTCCCCCTTGCCCTGGAATGGAAAGTTTGAGAGAGTCCTTATTATCACTGACAGAGCATGATGACAAACAGGTACATCAAATTGCCCGAAGTTTTCGGGACAGATGGTTCCCAAGACATACTAGAAAATTTGGTTATTCTGAGAGAGAGGATGGGAGATTGGAAGTTTATAGGGGTTCAAACAGCAGTAGGTTTACTGCATCACACAGTTTTCGGCACGATCAGGATTGCAGACCCACAGATGCAATTGATTGTATCAAGCAGTCGATGCCTACATCTTTGCCAGATACTCATCCTGCAGAGGTCTGTTCTCTGGCTTCGGCAGCTAGTCACTCAGTGAATGGACAAAAAGTCCGTAAGCGTAAGAGTCGATGGGATCAGCCTGCAGATACGAGCCTAGATCTGAGATCTAAGGAGCAGAAGCTTGAATCAACATCTGTGCAGGAATTGAATTCCAGCCAATTAAATAGTGTTGGAGCAGCATCAATGCTGATAGACAAAGTAAACAATGATGATAAGGACATTTCCCTCTCTGATTCTGTTGGAGTACCTTGTCGGCAAGATGAAGATATAAGGGCAGACAGTGCAGTGCCAAACATCCCTGAAGATATTCCTCCTGGATTTTCATCTCCCTTCAATCCCCCTGTTGCTTCCTCAAGTGCTTTTTCTGCAGTTTTAGATCCTCCTCGACAGAATATTGGCAATTTGAGTTGTGCTTTTTCCACAGTTGGGCACCTACCGGAAAGATTTATTTCTCGCTTGCCTGTATCCTATGGAATTCCATTTTCTATCATTGAGCAATGTGGAACATCTCATGCAGAGAATCTGGAGTGTTGGGATGTTGCTCCTGGAGTGCCTTTTCATCCTTTTCCACCCCTACCACCATATCCCCGAGGTATGAGAGGCCCGCCTACATCTGCCTGTGGTACTGCTGGACAATCGTCTCAGGAAGGGCAGGTCAACAGCCATGATTCTCGAACTTCTTTCTCAGAAGAAAGCCCTCCTAGTACAAGTACTAATTACCAAACAGATTTGTGCACTCCATCAAACAACCAACAGATAGCGAAACGGGCAAAAGAATCATCATGTGACTTGGGACGAAGATACTTTAGGCAGCAGAAGTGGCGTAATACAAAGTTCGGCCCTCCTTGGTTACAGAGAAGAAGTCAGTGGGGATGCCAGGGGAACTTCAGGGGTGGGGTGAGCACTATAGGTGATGAAAATATACCCGACGAGGAAATAAGTCCATATTACTCGGATGAAGCAAGCGGTAGAGTGGATAAAGCTAATGGTGATTTTTATCAGCATTTGCAGAACCAAAATCTGCGTTAG | 6339 | 42.31 | MGSCDDPAVIGEPFRASVTRLVRCSSQPLPEHQSHQEMASFSSNSREGQMFEPDRGLGVTTASVCMNASDLDTSGEDGTLRGFEHAADSLLMDKRLDGDSGGSDPCLNLDNEYCNEGNKTLSLDMKESEDVDGLVDILGCDATMEMISLTESLVNSVKPEELDNNSCIIDAPAKFERDDTVQNGPILAGTGTRTDDLKSSYVCEIVSNSASADGLPNDFIQKNELENDGAGCSFSEVADRITEASVELEADMLNEMSPLQSGQILPIHVGQSIANCDRYVCRMDGKSLSSTSGETVTEVADMNSNPEVCLQMLPSQGCDRIGECLQSDGLPLTIHASENDLCEEKHDSNSSSKYIPEVGGDDSDVLTNNNSDGGQHTVPGIGNDHNLEDATVQVNHNCVELLASPLPSQLPNSEKDEFYGMLNGADIPIKYISSINSCSVGDQDNNDIEKVGCVSEVKCPETVITSSKRSGRRRTSSQKTVTKRASRKTKKKVPEPLIFDTARRRRSSISRPARPSPWGSLGHIIQSFEEIDYVLVNQTQKQGNEKSKGNQGGAKRNKKQISESSHRSRKGTQGKSATSTSTNRIRLKVKLGKNVGHNFLNIVVPEIVDSSLSAKGVNCNYGNESYWEGNMEFPPSTLGVDDQKAEEGPLRKIFCYSRNQDKEDNCPDASVVNEQCTNNDSSCTIGIDKSSEKHADDNLCVSSHLVDPVATSDTRSLDPGTSPDSEVINSVLDIQVGAARQEILQDSVLASLEDFAASGNAPGSKKGRKKDKPSRAVSYSEERGTSVSACSNRSKSSKKHGRRQNVDNQLSSGETFTYADANVLNYSLTVKELSMEQVSLLTEIELPEETLKAEDILNDKECCRADVGSVFPESENSKTFLPSQSAKKKHPKGSKSIKTSKGKSKAPGSKNKIKNVSNERVYQRKSFKKSKSKEALCDRVVTETESHQIIGNCLVDKPEKSDNIIASSVAVDLSVVQGAVKEQYMPPRNAWVLCDDCHKWRRIPASLVDSLGHASCTWTCKDNVDKTFANCSIPQEKSNAEINAELEISDESGEENGSKKRLTYRELESFHPATVTAVPQQNKFASISSNQFLHRSRKTQTIDEIMVCHCKPALDGRLGCGDECLNRMLNIECVRGTCPCGDLCSNQQFQKRKYAKLQWLRCGKKGYGLQLLEDISKGQFLIEYVGEVLDMHAYEARQKEYALNGHRHFYFMTLNGSEVIDACGKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKKGEEVTFDYNYVRVFGAAAKKCYCGSFHCRGYIGGDPLNSEVIIQSDSDEEFPEPVMLRADGRSLNNNLSTAVSSMDVAKMQSSEHLKGNRDKRDQPIRIPSELKISEEKVDPLKLSASKISDEKEDPLKLSATKISEEKEDPVNLSASTISPLHSSLEFEDSKVASPIPVPDITHQTEDVTSQPIFVDQTEISLSDNIPDKNTCSIEQEAKLSVDDIDARKKSKLDSVEDKQVYIKSHPRMKTSRKPGSIKKGKVSSAEKIQITNRSQISSVKPKRLIEGSPVNRFEAVEEKLNELLDAEGGISKRKDAPKGYLKLLFLTAASGASASGEAIQSNRDLSMILDALLKTKSRLVLTDIINKNGLRMLHNIMKQYRSDFKKIPILRKLLKVLEYLVTREIITSEHINGGPPCPGMESLRESLLSLTEHDDKQVHQIARSFRDRWFPRHTRKFGYSEREDGRLEVYRGSNSSRFTASHSFRHDQDCRPTDAIDCIKQSMPTSLPDTHPAEVCSLASAASHSVNGQKVRKRKSRWDQPADTSLDLRSKEQKLESTSVQELNSSQLNSVGAASMLIDKVNNDDKDISLSDSVGVPCRQDEDIRADSAVPNIPEDIPPGFSSPFNPPVASSSAFSAVLDPPRQNIGNLSCAFSTVGHLPERFISRLPVSYGIPFSIIEQCGTSHAENLECWDVAPGVPFHPFPPLPPYPRGMRGPPTSACGTAGQSSQEGQVNSHDSRTSFSEESPPSTSTNYQTDLCTPSNNQQIAKRAKESSCDLGRRYFRQQKWRNTKFGPPWLQRRSQWGCQGNFRGGVSTIGDENIPDEEISPYYSDEASGRVDKANGDFYQHLQNQNLR* | 2113 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 10047496 | 10069549 | - | Chy3G057300.1 | Chy03g00750 | 222911 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 27 | 50 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 757 | 808 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1346 | 1366 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1976 | 2023 | - | - | |
| Chy03g00750 | 2112 | SMART | PostSET_3 | 1280 | 1296 | IPR003616 | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 472 | 490 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1788 | 1803 | - | - | |
| Chy03g00750 | 2112 | PANTHER | SET DOMAIN PROTEINS | 476 | 2028 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1778 | 1803 | - | - | |
| Chy03g00750 | 2112 | Pfam | AWS domain | 1117 | 1152 | IPR006560 | GO:0005634|GO:0018024 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 779 | 794 | - | - | |
| Chy03g00750 | 2112 | Gene3D | SET domain | 1054 | 1312 | IPR046341 | - | |
| Chy03g00750 | 2112 | ProSiteProfiles | Post-SET domain profile. | 1280 | 1296 | IPR003616 | - | |
| Chy03g00750 | 2112 | SUPERFAMILY | SET domain | 1083 | 1293 | IPR046341 | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 27 | 49 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1338 | 1366 | - | - | |
| Chy03g00750 | 2112 | SMART | set_7 | 1155 | 1278 | IPR001214 | GO:0005515 | |
| Chy03g00750 | 2112 | Gene3D | - | 988 | 1048 | - | - | |
| Chy03g00750 | 2112 | ProSiteProfiles | Zinc finger CW-type profile. | 985 | 1039 | IPR011124 | GO:0008270 | |
| Chy03g00750 | 2112 | CDD | SET_SETD2 | 1154 | 1296 | IPR044437 | GO:0010452|GO:0046975 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 1962 | 2023 | - | - | |
| Chy03g00750 | 2112 | Pfam | SET domain | 1166 | 1272 | IPR001214 | GO:0005515 | |
| Chy03g00750 | 2112 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC | 476 | 2028 | - | - | |
| Chy03g00750 | 2112 | Pfam | CW-type Zinc Finger | 991 | 1037 | IPR011124 | GO:0008270 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 873 | 913 | - | - | |
| Chy03g00750 | 2112 | ProSiteProfiles | AWS domain profile. | 1103 | 1153 | IPR006560 | GO:0005634|GO:0018024 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 541 | 558 | - | - | |
| Chy03g00750 | 2112 | ProSiteProfiles | SET domain profile. | 1155 | 1272 | IPR001214 | GO:0005515 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 491 | 507 | - | - | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 541 | 583 | - | - | |
| Chy03g00750 | 2112 | SMART | shorttest3 | 1103 | 1154 | IPR006560 | GO:0005634|GO:0018024 | |
| Chy03g00750 | 2112 | MobiDBLite | consensus disorder prediction | 464 | 520 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy03g00750 | - | - | - | csv:101204735 | 3950.98 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g00402 | Chy-Chr1:2845943 | Chy03g00750 | Chy-Chr3:10047496 | 9.73E-13 | dispersed | |
| Chy03g00494 | Chy-Chr3:6833266 | Chy03g00750 | Chy-Chr3:10047496 | 5.81E-53 | dispersed | |
| Chy03g00750 | Chy-Chr3:10047496 | Chy05g00585 | Chy-Chr5:6644715 | 1.36E-38 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g211 | Blo01g01308 | . | Bda01g00676 | . | Bpe02g00629 | . | . | Bma01g02090 | Cmo04g02507 | Cmo15g00659 | . | . | . | . | . | . | . | Bhi04g01862 | Tan11g1236 | . | . | Hepe02g2211 | . | Lcy10g1258 | Cla08g00625 | Cam08g1044 | Cec08g0630 | Cco08g0742 | Clacu08g0751 | . | Cre08g0560 | . | . | Cone17ag0818 | Cone20ag0423 | . | . | . | Cme03g00490 | . | . | . | . | . | . | . | . | . | . | . | . | . | Car04g02314 | Car15g00596 | Cpe01g02076 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi08g00466 | . | Chy03g00750 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0003381 | 1 | 5 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 6 | 3 | 1 | 48 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17683 | PF00856 | SET | 3.70E-18 | No_clan | Chy | TR |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chy03g00750 | Chy_Chr03 | FPKM | 3.3032 | 3.376334 | 4.803314 | 5.210628 | 0.905488 | 0.968073 | 1.295924 | 4.457355 | 4.312794 | 4.9501 |