Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00775 ATGTCGGAAGTAATTTCCGTGATGGATATTGACGACGATAATGGCAACAACGAAGCTGAAAAGGCAGTCAAGGGAAAAAACGTTGCCAGTCCTGCCGCCGCACCCGAAGGCAAAGCGATACCCTGGGTTGAGAAGTTCCGGCCTAAGTCTCTCGCTGATGTTGCTGCTCACCGTGACATTGTTGACACCATCGACAAGCTGACGAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGTACTGGCAAGACATCAACTATTCTAGCGGTTGCTCGCAAGCTTTATGGAACAAACTACCACAACATGATTTTGGAGCTGAACGCATCAGATGATAGAGGGATAGATGTTGTTAGACAGCAGATTCAGGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGGCAAAAGCGTCTGTAAAATTGGTACTGTTGGATGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGAAGAGTAATTGAGAAATACACAAAAAATACAAGGTTTGCTCTTATCTGTAATCACGTCAATAAGATTATTCCAGCATTACAATCAAGGTGTACCCGCTTTCGATTTGCCCCCCTTGATAACTTTCATGTCACTGAACGACTCAGATATGTTATTGAGGCTGAGAGGTACAGTTTCCCTTGTTTCACTTACAATACATGCATAAGTCTCATTATTGCTTACAGTCTGACAAGCAAATATACAAGTCTTTGA 732 43.72 MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERYSFPCFTYNTCISLIIAYSLTSKYTSL* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10505716 10507196 + Chy3G057550.1 Chy03g00775 222936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00775 243 Gene3D - 35 198 IPR027417 -
Chy03g00775 243 PANTHER REPLICATION FACTOR C SUBUNIT 5 36 217 - -
Chy03g00775 243 Pfam ATPase family associated with various cellular activities (AAA) 76 197 IPR003959 GO:0005524|GO:0016887
Chy03g00775 243 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 36 217 - -
Chy03g00775 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 220 IPR027417 -
Chy03g00775 243 CDD AAA 60 198 - -
Chy03g00775 243 SMART AAA_5 72 202 IPR003593 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00775 Chy-Chr3:10505716 Chy07g00561 Chy-Chr7:4772837 7.35E-55 dispersed
Chy03g00774 Chy-Chr3:10484610 Chy03g00775 Chy-Chr3:10505716 6.96E-43 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00775 K10756 - csv:101217230 427.943