Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy03g00775 | ATGTCGGAAGTAATTTCCGTGATGGATATTGACGACGATAATGGCAACAACGAAGCTGAAAAGGCAGTCAAGGGAAAAAACGTTGCCAGTCCTGCCGCCGCACCCGAAGGCAAAGCGATACCCTGGGTTGAGAAGTTCCGGCCTAAGTCTCTCGCTGATGTTGCTGCTCACCGTGACATTGTTGACACCATCGACAAGCTGACGAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGTACTGGCAAGACATCAACTATTCTAGCGGTTGCTCGCAAGCTTTATGGAACAAACTACCACAACATGATTTTGGAGCTGAACGCATCAGATGATAGAGGGATAGATGTTGTTAGACAGCAGATTCAGGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGGCAAAAGCGTCTGTAAAATTGGTACTGTTGGATGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGAAGAGTAATTGAGAAATACACAAAAAATACAAGGTTTGCTCTTATCTGTAATCACGTCAATAAGATTATTCCAGCATTACAATCAAGGTGTACCCGCTTTCGATTTGCCCCCCTTGATAACTTTCATGTCACTGAACGACTCAGATATGTTATTGAGGCTGAGAGGTACAGTTTCCCTTGTTTCACTTACAATACATGCATAAGTCTCATTATTGCTTACAGTCTGACAAGCAAATATACAAGTCTTTGA | 732 | 43.72 | MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERYSFPCFTYNTCISLIIAYSLTSKYTSL* | 244 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10505716 | 10507196 | + | Chy3G057550.1 | Chy03g00775 | 222936 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy03g00775 | 243 | Gene3D | - | 35 | 198 | IPR027417 | - | |
Chy03g00775 | 243 | PANTHER | REPLICATION FACTOR C SUBUNIT 5 | 36 | 217 | - | - | |
Chy03g00775 | 243 | Pfam | ATPase family associated with various cellular activities (AAA) | 76 | 197 | IPR003959 | GO:0005524|GO:0016887 | |
Chy03g00775 | 243 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 36 | 217 | - | - | |
Chy03g00775 | 243 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 40 | 220 | IPR027417 | - | |
Chy03g00775 | 243 | CDD | AAA | 60 | 198 | - | - | |
Chy03g00775 | 243 | SMART | AAA_5 | 72 | 202 | IPR003593 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g00775 | Chy-Chr3:10505716 | Chy07g00561 | Chy-Chr7:4772837 | 7.35E-55 | dispersed | |
Chy03g00774 | Chy-Chr3:10484610 | Chy03g00775 | Chy-Chr3:10505716 | 6.96E-43 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy03g00775 | K10756 | - | csv:101217230 | 427.943 |