Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00834 ATGGTACCTTCGGGGCCATCTACACCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCACAGTCAGCTTTTCCTTCTCTTGTATCCCCTCGGACACAGTTTAACAGTATGAATATGCTTGGTAATACACCCAGTATGTCTTCTCTCCTAAATCAGTCATTTGTGAATGGAGTTCCGAATTCTGGGCCCTCAGGCCTTGGAAATAGCCAACGAGTAGGTATGGACGCTGGTTCTGAGTCAGATCCATTTTCACTCGTTGGCAATGGTGTGAACTTCAACAATACCCCTTCCTCATTGGTGACATCAAATACAGCAAACCCTGGTTCATCTAGTCAAGTTTCAGTGCAGCAATTTTCAAATCATTCTAGTGGCCAAATCTTACCCAATCAACAGCAATCACAGCAAATTGAATCCCAGAACTTCCAACATAGTCAGCATTCAATGCAACAGTTCGCTACGTCTAATAACACGCAGCAGTCACAGCAGCTGCAGCAGCAACAACAACATCAATTCCAACGAGGAAGCCTATGCAGTGTCGGACCTGTCAAGTTGGAACCTCAAATGAATAATAATGATCTCCAAGGACAGCAACTGCAGCAGCAACAGCAGTTGCAGTCAATGAGGAATCTTGGTCCTGTGAAACTAGAACCACAACAACTTCAATCAATGAGAAACATGGGTCCTGTAAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACATCAGCAACATCAACATCAACATCAACATCAACAGCAACAGCAACAGCAACAACAACAGTTACTGAGTATGTCTAGGCAGTCCTCGCAGGCTGCTGCTGCGCAGATTAATATTTTGCAACAACAAAGACTCTTGCAATATCAACACCAACAGCAACTCCTGAAGGCTATACCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTACCATTGAGATCCCCTGTAAAATCTGTTTATGAACCTGGCATGTGTGCTCGGCGCTTAACGAATTATATGTGCCAACAGCAGCAAAGGCCTGAAGACAACAATATCGAGTTCTGGAGGAAATTTGTTGCAGATTACTTTGCTCCCCATGCCAAAAAGAAATGGTGCGTTTCAATGTATGGAAATGGTCGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCGACTTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAGTATGAGAGTGGAACGCTCGAAGAGCTTCTCTATGTTGATATGCCCCGCGAATATCATAATTCATCCGGACAAATTGTCCTAGATTACGCAAAAGCAATACAAGAAAGCGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGGATAGTATTTTCTCCTGACTTAAAGATATGTTCTTGGGAATTTTGTGCTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTGCTAATACCTCAGGTTAGTCAGTTGGGTGCAGCTGCTCAGAAGTATCAGACTGCAATTCAAAATGCATCATCAAACTTGCCTACTCCAGAGTTACAAAATAATTGCAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTTAATGACTTGGGATATACGAAGAGATACGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGACTACAGCCAAGAAACTACGACTGGGCCAATTGAGAGCTTAGCAAAGTTTCCGCGAAAGACGAATGCTTCACCTGGCTTCCACAGCCAAACTCAAAATACCGAGCAACAGTTACCTCAACCTCAGCAAACAAGTGATCAAAACGCAAACGGTGATCAAAGCTCTGCTCAGACTGCTCCGATGCAGCTTGCTGCTAACAATGGTGTTTCTGTTCCAAGTGCAAATAACTCTGGTAATCCAGCATCAACTTCATCTCCCGCCAGTACCATTGTTGGGTTACTCCACCAGAATTCCATGAACTCCAGACAGCAGAACTCTATCAGTAGTGCTGGCAGCCCTTATGCTGGAAATTCTGTGCAAATGTCGTCTCCAGGTTCCTCAGCGATTGCTCAGGCACAAGCAAACTCCTCATTCCAATCGCCTACATTATCCTCACCTAACAATCATCCACAATCATCAATTGGCACTGCAACAACTACTAATCACATGAGTGCCGCTAATTCTCCGGCAAATGTTCCCTTGCAACAGCCAACACAATCTTCCGAAGCCGATCAAAACGAGTCTCAGAGTTCTGTACAAAAGATTATTCAGGAATACATGATGTCAAATCATCTAAACGGGATGAACACAATGACTGGTGTATCCTCTATAGGAGATGATGCGAAAACTGTTAATGGAGTGTTACCAGGAAACAATGTTATGAGTCTCAATGGACGGAATGGCCTCATCGGAACAGGAACTGCTAATGGTGTTTCTGGTATGAGGACTGCAGGATATGGTTCAATGAGTGGTGGTGGGGGACTCAGTCAGACTAATATGGTCAATGGAATGAAATCTGCAATGGGAAATAACTCGATTTCGAATGGGAGAATTGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGGGACCAGCTTCTTAATGGACTTGGAGCTGTGAATGGATTTAATAATCTTCCATTTGATTATTGA 2754 43.86 MVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFNSMNMLGNTPSMSSLLNQSFVNGVPNSGPSGLGNSQRVGMDAGSESDPFSLVGNGVNFNNTPSSLVTSNTANPGSSSQVSVQQFSNHSSGQILPNQQQSQQIESQNFQHSQHSMQQFATSNNTQQSQQLQQQQQHQFQRGSLCSVGPVKLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQSMRNMGPVKLEPQQSDQSLFLHQQHQHQHQHQQQQQQQQQQLLSMSRQSSQAAAAQINILQQQRLLQYQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKSVYEPGMCARRLTNYMCQQQQRPEDNNIEFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQTAIQNASSNLPTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETTTGPIESLAKFPRKTNASPGFHSQTQNTEQQLPQPQQTSDQNANGDQSSAQTAPMQLAANNGVSVPSANNSGNPASTSSPASTIVGLLHQNSMNSRQQNSISSAGSPYAGNSVQMSSPGSSAIAQAQANSSFQSPTLSSPNNHPQSSIGTATTTNHMSAANSPANVPLQQPTQSSEADQNESQSSVQKIIQEYMMSNHLNGMNTMTGVSSIGDDAKTVNGVLPGNNVMSLNGRNGLIGTGTANGVSGMRTAGYGSMSGGGGLSQTNMVNGMKSAMGNNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLPFDY* 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11531633 11542027 - Chy3G058140.1 Chy03g00834 222995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00834 917 MobiDBLite consensus disorder prediction 67 91 - -
Chy03g00834 917 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 917 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 1 41 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 8 41 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 100 185 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 257 281 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 688 780 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 612 676 - -
Chy03g00834 917 MobiDBLite consensus disorder prediction 600 676 - -
Chy03g00834 917 PANTHER LIM DOMAIN-BINDING PROTEIN 1 917 IPR029005 -
Chy03g00834 917 MobiDBLite consensus disorder prediction 67 185 - -
Chy03g00834 917 Pfam LIM-domain binding protein 349 603 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00579 Chy-Chr3:8283731 Chy03g00834 Chy-Chr3:11531633 0 dispersed
Chy03g00834 Chy-Chr3:11531633 Chy09g00919 Chy-Chr9:11983160 3.30E-116 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00834 - - csv:101221714 1534.62