Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00855 ATGGCTACTGAGGGCAGTCCCAGGACTGATATCTCAACAGATGGGGACACAGATGAAAAAAGCGGGAGGCCTGATAGAGGTCAACTTGCTCTTACTATGGCTTCTGATTCTAGTGACAGATCAAAGGATAAAACTGATCAGAAGACTCTTCGCCGGCTAGCACAAAATCGTGAGGCTGCAAGGAAAAGCCGTTTGAGGAAAAAGGCATATGTTCAACAACTAGAAAGCAGTCGATTAAAGTTGACACAACTTGAGCAGGAGCTTCAGCGAGCACGACAACAGGGAATTTTCATATCAAGCTCGGGTGACCAGACTCATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATATGCCCGTTGGCTTGAAGATCACAATCGTCAACTGAACGAATTGAGATCGGCTGTTAACTCACATGCAAGTGACCCAGAATTGCGTATTGTTGTCGATGGCATCTTGGTTCATTATGATGAGCTCTTTAGGCTCAAGGGAAATGCAGCAAAGGCTGACGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAAAGATGTTTTCTTTGGCTTGGGGGTTTTCGTTCATCCGAGCTCTTAAAGCTTCTTGTAAATCAACTGGAGCCTCTAACGGAGCAGCAGTTGGTGGGAATCACAAACTTGCAGCAATCATCACAGCAGGCAGAAGATGCATTATCACAAGGGATGGAGGCCTTGCAACAGTCCCTGGCAGAGACATTGTCGAGTGGAGCTCTCGGTTCCTCTGGTTCATCAGGGAATGTCGCAAACTACATGGGTCAAATGGCCATGGCCATGGGTAAACTCGGGACCCTCGAGGGCTTTATACGCCAAGCCGACAATCTACGACAACAGACACTTCAACAAATGCACCGAATATTGACAACTCGTCAGTCTGCTCGTGCACTTCTTGCCATACATGACTACTTCTCCAGACTACGTGCTCTTAGTTCGCTCTGGCTTGCTCGTCCCAGAGAGTAA 1002 47.11 MATEGSPRTDISTDGDTDEKSGRPDRGQLALTMASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYARWLEDHNRQLNELRSAVNSHASDPELRIVVDGILVHYDELFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGALGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE* 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 11789748 11793720 + Chy3G058350.1 Chy03g00855 223016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00855 333 ProSiteProfiles DOG1 domain profile. 113 330 IPR025422 GO:0006351|GO:0043565
Chy03g00855 333 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 66 IPR004827 GO:0003700|GO:0006355
Chy03g00855 333 Pfam bZIP transcription factor 48 88 IPR004827 GO:0003700|GO:0006355
Chy03g00855 333 Pfam Seed dormancy control 130 205 IPR025422 GO:0006351|GO:0043565
Chy03g00855 333 SMART brlzneu 44 107 IPR004827 GO:0003700|GO:0006355
Chy03g00855 333 Coils Coil 67 94 - -
Chy03g00855 333 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 46 90 IPR004827 GO:0003700|GO:0006355
Chy03g00855 333 PANTHER TRANSCRIPTION FACTOR TGA9 4 333 - -
Chy03g00855 333 MobiDBLite consensus disorder prediction 1 50 - -
Chy03g00855 333 SUPERFAMILY Leucine zipper domain 48 91 IPR046347 GO:0003700|GO:0006355
Chy03g00855 333 MobiDBLite consensus disorder prediction 11 25 - -
Chy03g00855 333 Gene3D - 47 99 - -
Chy03g00855 333 Coils Coil 124 144 - -
Chy03g00855 333 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 4 333 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g00855 Chy10g01378 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00855 Chy-Chr3:11789748 Chy10g01378 Chy-Chr10:17993986 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17687 PF14144 DOG1 1.00E-31 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00855 K14431 - csv:101213210 598.586