Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00887 ATGGCAGCGCCGAAGCCTCGCACCACTCGGTCCAGGTCTCACAGGGACGTTCCTGATTTGGAGAAGATGGACGCTGCTTACAGTTGGGACGCCCTTGAATGGACCAAAATTGAGCCTGTTACGCGGTCGGTTTCGCGTGTCAACTTGGATTGCCTGCTTGAGGCTGAACAAGTGATTGCTGAGGGCTACGGTGTTGTTCTTGTGAATACTGATGAGGCTGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGACGTTATTTCCCTTGGCACTATACCACTGGCGACAATTGATAAATTCAATAAAATTGTTGTGAAGTCAAATGCTGTCTCTCGCCAATCTGAAAAGTCTTCACCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATTGTCTTTGGTTTCCGTCCAAGAACAAAACAGAGGCGTAAAGTATATGATGCATTATTGAGGTGTATGAAACCGGCAAGAATATGGGATCTATATGCATTCCAGTGTGGGCCATCCAAGTACAGTAATACAGACCCAAAAGTTCGTTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACATGCATCAATGAGCATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTAAAATCAATTCCAGTTATACTCTGTGTCAGAGTTATCCATTTGCATTGGTTGTTCCTAAACACTTTAGTGATGAAGAGATGTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGGACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACCGATGAAAAGCTTGTTGCTGCACTTTGCTCGAATCTTGCTGGTGTTCGAGGGTCACTGCGTAGGAAGCTTTATATAGCGGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCCATGGGAGGTGGCTCAGAGTCTTCATCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACTCGGCTAAGAGAGTACTTGGATACACATGGTGAAAAGTCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGGGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACTCTGGGAGATAGTGGTTGGTTAATCCATGTTCAAAGCGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAAAGCAACGGTGCTAGTTCATTGCAGTGATGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTGCTTGATCCATATTATCGGACGTTTGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCATGCCGACCGTATCAGGAAGTGGTAACATGCCATATGAACTATCTAGGCAATCTTCAACTGGAAGTTTTTCTTCTTCACCCATGCGTCAGTCATCTGGAGCATTCATATCTCAAGCTTCCAGTTCTCCTCATGCACAAACATCCAACAACTGTTCTCCCATATTCTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCTTTTGAGTTCTCTTCAGCATTTCTTGTGGATCTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGTCAGCAATGTGCAGTTTCTGAAGTTTGTGGCTGTCTATGGGCGTATTTAGCTGATTTACGAGCCTCGGAAGGAGGTTCACATGTGCATTATAACCTTTTCTATGATCCAACGATTCCTACCAAACATGAAGGTGCTCTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAATTTCATCTTCGTTGGGCTTGCCCAAAAGAATCTCAAGCTGGGGAACTTGAAGTCAGATGCAGGAAAATGGCTATACAATTATCTGAAATGCAGAAGGACAAAGAAATAGCCGAGAGAAAAGCCCAGGAGATGACGGCTGCCATGGAATCATTAAAATCAGAGTTGCAAAACGAGAAACAGTTAAGTACATCAGCTAGGAACGTTGCAAAAAATGCAAGCAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGCTATTGTACTGTTGACATTGATGGCGACCTCGTGAAAAAATCCAACCAGAAAAGTCATCCTGCTTCAAGGACTTCACATCGTTCACTGCCATCCCCTAGTGAAGAGAATGATCTCTCCCTTTCTATAACGGTTACAGCAGATGATGTGCCAAGTAACCCCCTCAGTCACATCTGTGAAGCTCTTTGCCCATTACGCACTCGGGATGGAGGGTGCCAGTGGCCTGATGCTGGTTGTGCTCACATGGGTAGCCAATTTATTGGAATGAAGGCAAATTTTGAAGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2580 43.8 MAAPKPRTTRSRSHRDVPDLEKMDAAYSWDALEWTKIEPVTRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVISLGTIPLATIDKFNKIVVKSNAVSRQSEKSSPSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLRCMKPARIWDLYAFQCGPSKYSNTDPKVRLLNEYFRLLGKGSLHASMSMIEDGSFTLSNELWRITKINSSYTLCQSYPFALVVPKHFSDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSNLAGVRGSLRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGMPTVSGSGNMPYELSRQSSTGSFSSSPMRQSSGAFISQASSSPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGGSHVHYNLFYDPTIPTKHEGALLPPAAALAPTLWPQFHLRWACPKESQAGELEVRCRKMAIQLSEMQKDKEIAERKAQEMTAAMESLKSELQNEKQLSTSARNVAKNASKECEAIKRAIQSLGCKVQVSSNGYCTVDIDGDLVKKSNQKSHPASRTSHRSLPSPSEENDLSLSITVTADDVPSNPLSHICEALCPLRTRDGGCQWPDAGCAHMGSQFIGMKANFEAFDQLSIYDGYFKPE* 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 12365777 12386213 + Chy3G058670.1 Chy03g00887 223048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00887 859 Coils Coil 675 716 - -
Chy03g00887 859 MobiDBLite consensus disorder prediction 764 788 - -
Chy03g00887 859 ProSiteProfiles Myotubularin phosphatase domain. 199 657 IPR010569 -
Chy03g00887 859 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 216 661 IPR029021 -
Chy03g00887 859 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 858 - -
Chy03g00887 859 CDD PTP-MTM-like 262 556 - -
Chy03g00887 859 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311|GO:0016791
Chy03g00887 859 PANTHER MYOTUBULARIN-RELATED 19 858 IPR030564 -
Chy03g00887 859 Pfam Myotubularin-like phosphatase domain 172 596 IPR010569 -
Chy03g00887 859 SUPERFAMILY PH domain-like 51 176 - -
Chy03g00887 859 Gene3D - 63 163 IPR011993 -
Chy03g00887 859 SMART gram2001c 43 111 IPR004182 -
Chy03g00887 859 MobiDBLite consensus disorder prediction 768 788 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00887 K18081 - csv:101204839 1705.26