Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g00945 ATGGAACCCCGTCCAGAAAATGGCAACCATGGATGGGAGAAGGAGCCCTCTTTGTGTGGTGGTGTGGCCGCGTACTGGAGTGGTGCGGCGAAAGGGCTCGAGGGAACTCATTTGGAGGAGTTTAAGCGTATGGTGATGGAGTTTCGTCGTCCTGTTGTGCGACTTGGAGGCGAGAGTCTGACGATAGCTCAAGTTGCTGCCATTGCTGCTCGTAGCTATGACGTTGTGGTGGAGCTTTCTGAGGAGGCTCGTTCTGCTGTGGAGGCGAGTAGTAGGTGGGTCGTTGAAAGTATGACTAATGGAACTGATAGCTATGGAGTTACAACTGGTTTTGGCTCTACGTCTCATCGGAGAACTGACCAAGGAGAAGCCCTTCAAAAAGAACTCATTAGATTCTTGAATGCTGGAATTTTTGGAAAAGATTCAAATTATTGCCATATGTTGCCTCAACAAGCCACAAGAGCTGCCATGGTAGTGAGAATCAACACACTTTTGCAAGGCTATTCTGGCATTAGGTTTGAAATTTTGGAAGCGATAGCCAAATTACTCAATCACAACATAACTCCATGTCTCCCTCTTAGAGGTACCATAACAGCTTCTGGTGATTTAGTTCCTCTTTCATACATTGCTGGACTTTTAACTGGTAGACCTAATTCTAAGGCCATTGGGCCAAACGGTGAATCTCTTAATTCAACTGAGGCATTTCATCTTGCTGGGATTACGGGTGGTTTCTTCAATTTACAGCCTAAAGAAGGTCTTGCTCTTGTAAATGGCACTGCAGTTGGGTCAGGCTTAGCTTCCATGGTCCTATTTGAAGCTAACTTTCTTGCTATCCTTTCGGAGATATTGTCAGCAATTTTTGCTGAAGTTATGCAAGGAAAACCTGAGTTTACAGATCATTTGACCCATAAATTAAAGCATCATCCCGGCCAGATTGAAGCAGCTGCTATTATGGAGCATATATTATATGGAAGTTCTTACGTCAAAGCTACTAAAAAGTTGCACGAAATTGACTCACTTCAAAAGCCTAAACAAGATCGATATGCTCTTAGAACTTCTCCCCAATGGCTCGGTCCTCAAATTGAAGTCATTAGATACTCCACCAAAATGATTGAACGTGAGATTAACTCAGTGAATGATAACCCGTTGATTGATGTATCGAGAAACAAGGCTTTGCATGGAGGAAATTTTCAAGGCACTCCCATTGGTGTCTCTATGGATAATACTCGTTTAGCGATTGCTTCTATTGGCAAACTCATGTTTGCACAGTTCTCAGAACTTGTCAATGACTTCTACAATAATGGGTTGCCTTCAAACCTCACCGCTAGTAGAAACCCAAGTTTAGATTATGGGTTCAAAGGTGCTGAGATTGCAATGGCTTCATATTGCTCTGAACTTCAATATTTGGCAAATCCAGTAACCAATCATGTTCAGAGTGCCGAACAACATAACCAAGACGTAAACTCATTAGGGTTGATATCATCGAGAAAAACAGATGAAGCTATTGAGATTTTAAAGCTTATGTCCACTACTTACTTAGTGGCATTGTGCCAAGCTGTTGATTTAAGACACATGGAGGAGAATTTGAAGAAAACAGTTAAGAACACTGTTAGCCAAGTGGCAAAAAAGATCCTTGTGTTGCATTTTAATGGCAATCTCCATCCATTTAGGTATAGTGAGAAGGATTTGCTTCAAGTTGTGGATAGAGAACACATTTTTGCCTATATTGATGACCCCTGCAGTGTTTCATATCCATTAATGCAAAAGCTAAGACAGGTATTGGTAGATCATGCTATAAAAAATGGTGAGAACGAAAGCAACCCAAGTGCTTCAATATTTCAAAAGATAATAGCTTTTGAAAATGAATTAAAAGCACTTTTACCTAAAGAAGTGGAAAATGCAAGAAGGGAAGTGGAAAAAGGAAGTGCTGCAATTGAAAACCAAATTAAAGAATGCAAATCTTATCCACTGTACAGGTTTGTCAGAGAAACATTGGGAACTCGATTGTTGACGGGGGAGAGAGATGCATCACCAGGAGAAGAGTTTGATAAGGTTTTTTCAGCCATTTCTACTGGAAAATTGATAGATCCGATGCTTGAGTGTTTAAAGGATTGGAATGGTGCTCCACTTCCGCTCAGTTAG 2142 41.27 MEPRPENGNHGWEKEPSLCGGVAAYWSGAAKGLEGTHLEEFKRMVMEFRRPVVRLGGESLTIAQVAAIAARSYDVVVELSEEARSAVEASSRWVVESMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRFLNAGIFGKDSNYCHMLPQQATRAAMVVRINTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGESLNSTEAFHLAGITGGFFNLQPKEGLALVNGTAVGSGLASMVLFEANFLAILSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILYGSSYVKATKKLHEIDSLQKPKQDRYALRTSPQWLGPQIEVIRYSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTDEAIEILKLMSTTYLVALCQAVDLRHMEENLKKTVKNTVSQVAKKILVLHFNGNLHPFRYSEKDLLQVVDREHIFAYIDDPCSVSYPLMQKLRQVLVDHAIKNGENESNPSASIFQKIIAFENELKALLPKEVENARREVEKGSAAIENQIKECKSYPLYRFVRETLGTRLLTGERDASPGEEFDKVFSAISTGKLIDPMLECLKDWNGAPLPLS* 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13011403 13014480 - Chy3G059250.1 Chy03g00945 223106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g00945 713 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 195 211 IPR022313 GO:0016841
Chy03g00945 713 CDD PAL-HAL 58 523 IPR001106 -
Chy03g00945 713 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 24 712 - -
Chy03g00945 713 Gene3D - 21 259 IPR024083 -
Chy03g00945 713 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 25 703 IPR005922 GO:0005737|GO:0006559|GO:0016841
Chy03g00945 713 Pfam Aromatic amino acid lyase 60 536 IPR001106 -
Chy03g00945 713 Gene3D Fumarase/aspartase (Central domain) 260 708 - -
Chy03g00945 713 PANTHER HISTIDINE AMMONIA-LYASE 24 712 IPR001106 -
Chy03g00945 713 Coils Coil 631 651 - -
Chy03g00945 713 SUPERFAMILY L-aspartase-like 25 712 IPR008948 GO:0003824
Chy03g00945 713 Gene3D - 526 647 IPR023144 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00945 Chy-Chr3:13011403 Chy08g00845 Chy-Chr8:15959396 0 dispersed
Chy02g01254 Chy-Chr2:9163776 Chy03g00945 Chy-Chr3:13011403 0 transposed
Chy03g00945 Chy-Chr3:13011403 Chy08g00844 Chy-Chr8:15943078 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g00945 K10775 - csv:101206890 1349.34