Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01036 ATGTCTAGTCTCTTCTTCACCTTTCTTCTCCTCTTTTTTTCCTTGCTTCTTCCTTCTCTAAATGCCTTGAGCCACCATTACTATGACCACATATGCCCTAATCTCGAGTCCATCGTCGCTCGAGAAGTCCGCTTAGCCACTGCAAACGACAAGACCGTTCCTGCCGCGTTGCTACGAATGCACTTCCATGATTGTTTCATCAGAGGTTGCGATGGCTCTGTACTTCTTGACTCCAAGGGGAAGAACACGGCTGAAAAAGATGGCCCTCCTAATATCTCTCTCCATGCTTTTTATGTCATTGACAATGCCAAGAAAGCAATTGAATCTACTTGTCCGGGTGTGGTTTCTTGTGCTGATATCTTAGCTCTTGCTGCTCGAGATGCTGTTGTTGTGTCGGGAGGTCCTCACTGGGAAGTTCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTAGTGAAACAAGACAATTACCAGCTCCCACATTCAACTTCTCTCAACTCCAACAAAGCTTCTCCCAAAGAGGCCTTTCTTTACATGATCTTGTCGCTCTTTCAGGAGGCCACACTCTTGGATTTGCCCATTGCTCGTCGTTTCAAAACCGAATCCACAACTTCAACTCGAGCCTCGATGTCGACCCATCATTGGATTCAAACTTTGCAGCCAGTCTACGTAGGGTATGTCCAGCGAGAAACAAGGTGAAAAACGCAGGGTCAACCATGGATTCGAGTTCAACAGTATTTGACAATGCATATTACAAGCTTCTTCTTGGAGGGAAGAGCATATTTTCATCAGATCAATCTTTGCTTTCAACACCAAAAACAAAGGCTTTGGTTTCAAAATTTGCCAACGAACAACATCTGTTTGAGAAGGCTTTTGTTAAGTCCATGGTGAAGATGAGTCAGATCGCCGGCGCGGGGCAAGAGGTCCGGCTGAACTGCAGGCTGGTCAGATGA 954 45.6 MSSLFFTFLLLFFSLLLPSLNALSHHYYDHICPNLESIVAREVRLATANDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVVSGGPHWEVPKGRKDGRISKASETRQLPAPTFNFSQLQQSFSQRGLSLHDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLDSNFAASLRRVCPARNKVKNAGSTMDSSSTVFDNAYYKLLLGGKSIFSSDQSLLSTPKTKALVSKFANEQHLFEKAFVKSMVKMSQIAGAGQEVRLNCRLVR* 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 13880093 13881350 + Chy3G060160.1 Chy03g01036 223197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01036 317 PANTHER PEROXIDASE 25-RELATED 8 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PANTHER PEROXIDASE 64 8 316 - -
Chy03g01036 317 Gene3D Peroxidase, domain 2 158 299 - -
Chy03g01036 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 Gene3D - 26 316 - -
Chy03g01036 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Chy03g01036 317 Pfam Peroxidase 40 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy03g01036 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00544 Chy-Chr2:3277477 Chy03g01036 Chy-Chr3:13880093 3.34E-155 dispersed
Chy03g01036 Chy-Chr3:13880093 Chy06g00900 Chy-Chr6:6580789 1.06E-126 dispersed
Chy03g01036 Chy-Chr3:13880093 Chy01g00415 Chy-Chr1:2928050 8.40E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01036 K00430 - csv:101214403 589.341