Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01063 ATGAGGAGAAGAAAGTGTTGGAGATGTAGTGATTTTGGGACGTTGGGGGTTGTTCTTTTTCTTAACATGTTACTAACGGCGGCGACAGTTGTAACGGTGCAAGACGAGGAGGAGAAGGTAGTGGCCGGAGAAGTGAAAGTGAAGGTGGGTGTGGTTTTTGATTTAGGTTCTGTTTTTGGGGAGATGAGTTTGAGTTGTATTTCAATGGCTCTGGAGGATTTATACTCTTCTCGGAGTTATTACAAGACTAGAGTTATTCTCCACAGCATTGACTCCAATAACACTGTTGTTGATGCAGCTGCTGCAGCTCTGGAATTGATAAAGAAAGAGGAAGTGCAAGCCATTTTAGGTCCAACAAGCTCTATGCAAGCTAACTTCATCATCAACATTGGAGATAAAGCAGAAGTTCCCATCATCTCATTTTCAGCCACACGACCTTCCCTCACTTCCCACCGCAGCTCTTTCTTCTTCCGAGCAGCTCAAAACGATTCATCTCAAGTCAAAGCCATTGGAGCCATTGTTAAGACCTTCAAATGGCGACAAGTCGTCCCTATCTATAGCGACAATGAGTTCGGCGAAGGTATCATCCCTTACCTAATTGACGCTTTACAAGAAGTCGACACCGATGTGCCATACCAAAGCAAAATTTCTCCCTCTGCCAAAGACAAGCAAATCATTGACGAGCTTAACAACTTGATGAAAATGCCAACTAGAGTGTTTGTAGTGCACATGGCACCCCACCATGCTTCACGATTGTTCACAATGGCTAAAGAAATTGGAATGATGAAACGAGGCTTCGTTTGGATAATCACAGATGCTATAGCAAATCTATTGGATTTAATAGACCCTTCAGTCCTTAAGGCAATGCAAGGAGTTGTGGGAATAAAAACTTACGTCCCAAGATCCAAAGGGCTTGATTCTTTCAAACATGATTGGAGGAAGAGATTTATGAGGTAG 957 43.05 MRRRKCWRCSDFGTLGVVLFLNMLLTAATVVTVQDEEEKVVAGEVKVKVGVVFDLGSVFGEMSLSCISMALEDLYSSRSYYKTRVILHSIDSNNTVVDAAAAALELIKKEEVQAILGPTSSMQANFIINIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQVVPIYSDNEFGEGIIPYLIDALQEVDTDVPYQSKISPSAKDKQIIDELNNLMKMPTRVFVVHMAPHHASRLFTMAKEIGMMKRGFVWIITDAIANLLDLIDPSVLKAMQGVVGIKTYVPRSKGLDSFKHDWRKRFMR* 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14066302 14067864 - Chy3G060430.1 Chy03g01063 223224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01063 318 PANTHER OS06G0188250 PROTEIN 18 316 - -
Chy03g01063 318 Pfam Receptor family ligand binding region 65 310 IPR001828 -
Chy03g01063 318 SUPERFAMILY Periplasmic binding protein-like I 46 316 IPR028082 -
Chy03g01063 318 PANTHER OS06G0188250 PROTEIN 18 316 - -
Chy03g01063 318 CDD PBP1_GABAb_receptor_plant 53 316 IPR044440 -
Chy03g01063 318 Gene3D - 164 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01063 Chy-Chr3:14066302 Chy03g01060 Chy-Chr3:14050081 6.52E-143 dispersed
Chy03g01063 Chy-Chr3:14066302 Chy03g01064 Chy-Chr3:14069020 1.43E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01063 K05387 - csv:101203794 579.326