Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01081 ATGGCTAATTTTTCAATAGCTTTGTTTCTCTTCACCTTTCTCCTCTTCAGTTTCTCAGAGGCTAGAGAGATTTTAGTCGGAGGAAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCTCGCTTTCGCATTGGCGACACTCTCGTGTGGGATTACGAAGATGGGAAAGATTCGGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCTGAACAGAGATTCGAAGATGGGAAGACGAAGGTGGAGCTAGAGAAGCCAGGACCATTTTATTTCATCAGTGGGGCAAAGGGTCACTGCGAGCAGGGCCAGAAGCTCATCGTTGTGGTCGTGACACCTCGCCGGAGGTTCATCGGGATCTCACCTTCGCCTTCTCCGGCGGAAGGTGAGGGTCCGGCGATTGCTCCGTCTAGTGGAGCTGGTAATTTGAAGGTTGGGTTTTTGGCGGTGGTTGTAGGAATTTTGGGTGTTGGTGTTGGGTTGGTTTGA 531 48.78 MANFSIALFLFTFLLFSFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPSPSPAEGEGPAIAPSSGAGNLKVGFLAVVVGILGVGVGLV* 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14196009 14196634 - Chy3G060610.1 Chy03g01081 223242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01081 176 CDD OsENODL1_like 22 124 IPR041846 -
Chy03g01081 176 PANTHER BLUE COPPER PROTEIN 6 172 IPR039391 GO:0009055
Chy03g01081 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055
Chy03g01081 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055
Chy03g01081 176 PANTHER EARLY NODULIN-LIKE PROTEIN 3 6 172 - -
Chy03g01081 176 Gene3D - 20 128 IPR008972 -
Chy03g01081 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01081 Chy-Chr3:14196009 Chy06g01800 Chy-Chr6:21647587 6.32E-38 dispersed
Chy07g00067 Chy-Chr7:626150 Chy03g01081 Chy-Chr3:14196009 6.60E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01081 - - csv:101210664 293.893