Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01097 ATGACTGCTTCTTCTCCCGGGATTCCGATGGGAATGGAGACTCTTACCAACGATAACCACAAGAAAATGCTTATTGCACTTATCGTTTGTGCTTCATTCGGTAGTGTGTTAGTGGTTTCACTGTTTTTGTGGATTTATTACAGAAGAAACCCCCCCAACTTCCATAAACGAAACGGTCAGAGCTCAGATGCCGAGAAGGGAGTTGTTGGGTTAGCTCCGATATTGCGTAAATTCAGCTCAAACAAAATGATGGGTAGCAATAAAGTATCTGTTCCACTCATTGATTACGAGGTGCTGGAAAAAGCCACCAACATTTTCGAGGAAAGCAACATTTTAGGGGAGGGTGGATTTGGAAGGGTTTACAAGGCTCGTTTAGAAGAAAACTTATGTGTTGCTGTAAAGAAACTTGAATGTACCGATAAGGATTCAGAGAAAGAATTTGAGAATGAAGTTGATCTATTGAGCAAAATTCATCACTCGAACATTATTCGCCTTCTGGGTTACACCATTCATGGGGAATCAAGGCTTCTTGTTTACGAGTTAATGGAAAATGGATCACTAGAGACATTGTTACATGGTCCCTCACATGGAGAGGCATTAACATGGCACATGCGCATGAAGATTGCTCTTGATGCAGCTAGAGCATTAGAATATTTGCATGAGCACTGCAAGCCATCAGTAATACATAGAGATCTGAAATCCTCCAATATTCTTTTGGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGCTTGTCTGTCATTGTTGGAGCACAAAACAAGAATGATATAAAGCTTTCTGGAACGATGGGTTATGTTGCTCCTGAATATCTTTTAGATGGTAAATTGACCGATAAAAGTGATGTCTATGCTTTTGGAGTTGTGCTTTTGGAGCTTCTTTTAGGAAGAAGGCCTGTAGAAAAACTGGCACCATCTCAATGTCAATCCATTGTCACATGGGCTATGCCTCAACTCACTGATAGATCAAAGTTACCCGATATTGTTGATCCGGTGATCAGAAACACAATGGACCCGAAACATTTATTTCAGGTTGCTGCTGTCGCTGTACTGTGTGTGCAACCGGAACCGAGCTATCGTCCCCTAATAACAGATGTTTTGCACTCTCTTATTCCTCTTGTTCCTGTTGAGCTTGGAGGGACTCACAGATCATCAACATCATAA 1182 41.29 MTASSPGIPMGMETLTNDNHKKMLIALIVCASFGSVLVVSLFLWIYYRRNPPNFHKRNGQSSDAEKGVVGLAPILRKFSSNKMMGSNKVSVPLIDYEVLEKATNIFEESNILGEGGFGRVYKARLEENLCVAVKKLECTDKDSEKEFENEVDLLSKIHHSNIIRLLGYTIHGESRLLVYELMENGSLETLLHGPSHGEALTWHMRMKIALDAARALEYLHEHCKPSVIHRDLKSSNILLDANFNAKLSDFGLSVIVGAQNKNDIKLSGTMGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRRPVEKLAPSQCQSIVTWAMPQLTDRSKLPDIVDPVIRNTMDPKHLFQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTHRSSTS* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14355904 14359019 - Chy3G060770.1 Chy03g01097 223258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01097 393 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Chy03g01097 393 PANTHER OS01G0750732 PROTEIN 15 391 - -
Chy03g01097 393 PANTHER BNAA04G14780D PROTEIN 15 391 - -
Chy03g01097 393 ProSiteProfiles Protein kinase domain profile. 106 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01097 393 Gene3D Phosphorylase Kinase; domain 1 72 181 - -
Chy03g01097 393 Pfam Protein kinase domain 106 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01097 393 CDD STKc_IRAK 112 379 - -
Chy03g01097 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Chy03g01097 393 Gene3D Transferase(Phosphotransferase) domain 1 182 381 - -
Chy03g01097 393 SUPERFAMILY Protein kinase-like (PK-like) 82 376 IPR011009 -
Chy03g01097 393 SMART serkin_6 106 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01097 Chy-Chr3:14355904 Chy08g00997 Chy-Chr8:17220308 3.08E-93 dispersed
Chy01g01953 Chy-Chr1:24733095 Chy03g01097 Chy-Chr3:14355904 5.98E-173 wgd
Chy03g01097 Chy-Chr3:14355904 Chy07g00350 Chy-Chr7:2851269 6.41E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71137 PF00069 Pkinase 6.40E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01097 - - csv:101205958 770.385