Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01122 ATGGCGGCAAAAGCTATGGGAGGAAGAAGTAAAACCCCAAAACAGAGGCAAATGCCGCGCTTGCTTCATGGGACGCTGCATGCCGATATATATGGAATCGACAGGCTTCAAACTGGATTTCCTATTTTCTGCGGGAAGGACAAAAGGTCGACCAAAAAGTTTCTTGCTGGAGTGAAGAGATGCATCCTTTGTCGTCCTGAGATTGTTGGATCTCGAATGTATGCAACAGTCGATCTTGATAAGGCCAGAGTTGGTCGAACGAGAATAGTGGATCAGCCATACAATCCTCAATGGAACGATCATTTTCGTATATATTGTGCTCATACAGTGTCACATATTATATTCACAGTTAAAGATGGAGATTTCATTGGTGCAACATTAATTGGAAGAGCTTATGTGCCTGTTGAGGAAATCATCAAGGGATTTGTATATGAGAAATGGGTTGACATATTAGATGAAGACGGTAAGCCTTTATATGGTCGTTCTAGAATCCATGTAAAGTTGCAATTTTCAAGTGTTAATGAAGACAGGAACTGGTCCCGAGGAATCTTGGATCCGAATTTTGAAGGTGTACCTTTCACATTCTTCAAACAAAGATGGGGTTGTAAAATTTCTCTTTACCAGGATGCCCATGTTTTAAACAACTTCCTTCCTCGGGTTGGTTTGTCAGGAGGGAATTTTCATGAAGTGCACAGGTGTTGGGAGGACATTTTTGATGCAATTAGCAACGCGAGACACTTGATTTACATAACTGGTTGGTCTGTGTATACAGAAATAACTTTGATCAGAGACCGAGAAAGAAGACAAACAGGAGATGATATTACTCTGGGACAACTGCTAAAGAAGAAGGCAGAAGAAGGTGTGACCGTTTTGCTTCTTGTTTGGGATGACAGGACTTCCATTGAAGTGTTCAAAAGAGATGGTTTGATGGCAACTCACGATCAAGAAACTGCAGAATACTTCAGGAACTCGAAGGTACGTTGCGTTCTATGTCCACGGAGACCTGATGTAGGCAGAAGTAAGATTCAGGGGTTTGAGACTGATACCATGTTTACTCACCACCAAAAAACAGTTGTGCTTGATAGTGAAATAGTTGGTGGAGGAACAGAAAAAAGAAGGATCATAAGTTTTGTTGGTGGCATTGATCTGTGTGATGGGAGATACGATACACCGCAGCACCCTTTGTTTTCAACTCTAGATTCAATCCACTATAACGATTTCCACCAGCCTAACTTTTCAGGCTCTTCAATTAGGAAAGGTGGTCCTCGAGAACCATGGCATGACATCCATTGCCGCCTAGAAGGGCCTGTTGCTTGGGATATTTTGTACAATTTTGAGCAAAGATGGAGAAAGCAAGTTGGAAACAACTCGTTGATTCCAATGCAAAAGCTTGAAGAAATCATTACCCGCCCAGTAATGGTTTTACCAGCAGACGACCCTGACACGTGGAGTGTTCAAATATTTCGGTCTATTGATGGTGGTGCTGTACATGGTTTTCCAGATACACCCGAAGTTGCATACAAAGTGAACCTTGTAACTGGAAAGAATAATGTTATAGATAGGAGTATTCAAGATGCTTATATTAATGCTATTCGCCGAGCAAAAAAGTTTATATACATTGAGAATCAATATTTCCTTGGAAGTTCTTATGGTTGGAAAGCAGCTGGTATAAGGGTAGAAGAAATCAATGCTTTGCATACGATTCCTAAGGAGATATCACTGAAGATTGTAAGCAAGATTGAAGCCGGAGAGAGATTTACAGCATATGTTGTGATTCCAATGTGGCCAGAAGGTATTCCAGAGAGTGCTTCAGTTCAAGCTATATTAGATTGGCAAAGGAGAACATTAGACATGATGTACACAGATATAGCTCAAGCCCTTCGGAAGAAGGGTCTTGATGCAAATCCTAGAGATTACCTGGCATTCTTCTGCCTTGGCAATCGAGAGAAGAAGAGAACTGGAGAATATATACCACCAGAGAAACCAGAGCCCAATTCGGATTATGCTCGGGCTCAAGAGCACCGACGTTTTATGATCTATGTTCACTCCAAAATGATGATAGTTGACGATGAGTACATAATTATTGGATCTGCCAACATCAACCAAAGATCAATGGATGGAGGAAGAGATTCCGAGATTGCAATGGGCGCTTTTCAACCTCGTCACTTGGCATCCAGTGAGCCAGCGAGAGGTCAAATCTACGGCTTCAGAGTGGCTCTATGGTACGAGCATCTTGGTCTGTTTGACAAAGTCTTCCATAACCCAGAGAGTGAAGACTGCATCCAATTCGTAAACAAGCTCGCTCAAGAGAACTGGCAATTTTACTCGGACGATACCTACGATGGCGATCTTCCTGGCCATTTGCTTTCCTATCCCATCCAAGTAGGCCCCAACGGGTCGGTTTCGGCGCTGCCAAAGTTTGAATTTTTCCCTGACACGAAGGCTCGTGTTCTTGGCCAACTATCCGAGTATCTACCCCCAATCCTCACCACTTGA 2496 42.67 MAAKAMGGRSKTPKQRQMPRLLHGTLHADIYGIDRLQTGFPIFCGKDKRSTKKFLAGVKRCILCRPEIVGSRMYATVDLDKARVGRTRIVDQPYNPQWNDHFRIYCAHTVSHIIFTVKDGDFIGATLIGRAYVPVEEIIKGFVYEKWVDILDEDGKPLYGRSRIHVKLQFSSVNEDRNWSRGILDPNFEGVPFTFFKQRWGCKISLYQDAHVLNNFLPRVGLSGGNFHEVHRCWEDIFDAISNARHLIYITGWSVYTEITLIRDRERRQTGDDITLGQLLKKKAEEGVTVLLLVWDDRTSIEVFKRDGLMATHDQETAEYFRNSKVRCVLCPRRPDVGRSKIQGFETDTMFTHHQKTVVLDSEIVGGGTEKRRIISFVGGIDLCDGRYDTPQHPLFSTLDSIHYNDFHQPNFSGSSIRKGGPREPWHDIHCRLEGPVAWDILYNFEQRWRKQVGNNSLIPMQKLEEIITRPVMVLPADDPDTWSVQIFRSIDGGAVHGFPDTPEVAYKVNLVTGKNNVIDRSIQDAYINAIRRAKKFIYIENQYFLGSSYGWKAAGIRVEEINALHTIPKEISLKIVSKIEAGERFTAYVVIPMWPEGIPESASVQAILDWQRRTLDMMYTDIAQALRKKGLDANPRDYLAFFCLGNREKKRTGEYIPPEKPEPNSDYARAQEHRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDSEIAMGAFQPRHLASSEPARGQIYGFRVALWYEHLGLFDKVFHNPESEDCIQFVNKLAQENWQFYSDDTYDGDLPGHLLSYPIQVGPNGSVSALPKFEFFPDTKARVLGQLSEYLPPILTT* 832
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14515013 14519443 - Chy3G061020.1 Chy03g01122 223283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01122 831 SUPERFAMILY Phospholipase D/nuclease 520 760 - -
Chy03g01122 831 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 387 IPR001736 GO:0003824
Chy03g01122 831 PANTHER PHOSPHOLIPASE D ALPHA 3 20 831 - -
Chy03g01122 831 PIRSF PLD_plant 11 831 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Chy03g01122 831 Gene3D Endonuclease Chain A 493 721 - -
Chy03g01122 831 SUPERFAMILY Phospholipase D/nuclease 175 459 - -
Chy03g01122 831 CDD C2_plant_PLD 18 170 - -
Chy03g01122 831 PANTHER PHOSPHOLIPASE D 20 831 IPR015679 -
Chy03g01122 831 Pfam C2 domain 71 149 IPR000008 -
Chy03g01122 831 ProSiteProfiles C2 domain profile. 6 148 IPR000008 -
Chy03g01122 831 Pfam Phospholipase D C terminal 749 820 IPR024632 -
Chy03g01122 831 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 677 704 IPR001736 GO:0003824
Chy03g01122 831 SMART C2_3c 25 147 IPR000008 -
Chy03g01122 831 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 70 173 IPR035892 -
Chy03g01122 831 SMART pld_4 349 387 IPR001736 GO:0003824
Chy03g01122 831 SMART pld_4 677 704 IPR001736 GO:0003824
Chy03g01122 831 Pfam Phospholipase D Active site motif 678 704 IPR001736 GO:0003824
Chy03g01122 831 Pfam Phospholipase D Active site motif 349 387 IPR001736 GO:0003824
Chy03g01122 831 Gene3D C2 domain 64 183 IPR035892 -
Chy03g01122 831 Gene3D Endonuclease Chain A 225 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01122 Chy-Chr3:14515013 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy02g00534 Chy-Chr2:3209316 Chy03g01122 Chy-Chr3:14515013 0 transposed
Chy03g01048 Chy-Chr3:13966886 Chy03g01122 Chy-Chr3:14515013 0 transposed
Chy05g01066 Chy-Chr5:15184079 Chy03g01122 Chy-Chr3:14515013 1.87E-18 transposed
Chy06g01975 Chy-Chr6:23784904 Chy03g01122 Chy-Chr3:14515013 0 transposed
Chy01g02000 Chy-Chr1:24975703 Chy03g01122 Chy-Chr3:14515013 0 wgd
Chy03g01122 Chy-Chr3:14515013 Chy07g01611 Chy-Chr7:20229345 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01122 K01115 - csv:101207900 1669.83