Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01173 ATGGCCTCGCAAAACCGCCCTGCCTCAACCCTTGAAACCATCGAAAACCAGTCGGAAGCCATTAAATCGATGTCAATAAGCAGTATACCGGGAACAGTAATCAAAAAGCTGAAAACCAATCTGGTATTCCAGTCAAAATGGGCTGAATTAAACGGCGCAATGGGCGATTTAGGGACATATATTCCCATAGTTTTAGCTCTGACATTATCCAGAAACATCAATTTAGGTACCACATTAATTTTCACCGGAATTTACAACATCATCACCGGCCTGATTTACGGCGTTCCAATGCCCGTCCAGCCAATGAAATCAATCGCTGCCGCAGCCCTGGCTGATCCAGAGTTCGGCGTGGCAGAGATCATGGCGGCCGGAATCCTGACCGGTGGAATCCTGTTTGTTCTGGGTGCGACGGGGCTTATGCATTTGGTTTACAAATTGATTCCGTTGGCGGTGGTGAGAGGGATTCAGTTGGCGCAAGGATTGTCGTTTACTCTGACGGCCATTAAATATGTTCGTTATGATCAAAATATGGCGAAATCTAAATCTGGCGATGCCCGTGAATGGTTTGGATTAGATGGGTTGATTTTGGCCGTTGTTTGTGCTTGTTTTGTGATCGTCGTTAATGGCGCCGGAGAAGATGAACATCAGCCGGAAGGAACTGAAAATGAGGCCCAAGGGGAAGCAAAAGGAGGAATTAATAAAGAGAAGGTTAGGAAGATCATAGCTTCGCTTCCATCAGCTTTCATAATTTTTTGTTTAGGCATTCTTTTTCTCTTCATCCGAAATCCAAAAGTGGTGAAGGAAATTACATTTGGGCCCTCATCCATCACCATTGTGAAGATCACAAAAAGCCAATGGAAAAAAGGGTTCATAAAGGGAACAATTCCTCAGCTTCCTCTCTCCATTCTCAACTCAGTTATCGCCGTTTGCAAGCTATCCATGGACCTTTTTCCGGCCAAGATTTTCACCGTCACGTCCCTCTCTGTCACCGTCGGGCTTATGAACATCGTCGGTTGCTGGTTCGGTGCCATCCCGACTTGTCATGGTGCTGGTGGTCTTGCCGGTCAGTATAAGTTCGGCGGTAGGAGCGGCGGGTGTGTCGCATTGCTTGGTGCCGCTAAATTGATGCTTGGTTTGGTTCTTGGAAGCTCTCTTGCAAAGGTTCTAAACCAATTTCCCGTAGGGATTTTGGGAGTTCTATTGTTGTTCGCTGGAGTCGAACTAGCGATGGCAGCGAGGGACATGAACACTAAAGAACAGGCATTTGTGATGTTATTATGCACTGGGGTTTCGTTGGTTGGCTCGAGCGCTGCACTAGGGTTCTTGTGTGCCATGATTTTTTCGTTGAGGCTCGAGGGATTCGGATCTCGCGTCTGTGGAGAGCTTCAGCTTACTGCGTTGAAGATGGCTGTCAAAACAGCTCATTCATTTAGAGATCGGACGCTGGAATTTCAGAACATAACAGAGAGGCTAAAGAAGTCTTTCTCATCTGGCACGGGAACAACTGGACCAAGTGCTGTTTCAAAATCAGAAGAGCAGCGCTCTGCTGTGGCCCTACAGTCTGAATTTAATAAAAGGGCTTCCAAGATTGGGTTAGGGATACACCAGACCTCTCAGAAACTCTCAAAGTTGGCAAAATTGGCAAAGAGGACTTCTGTTTTTGATGACCCAACAATGGAAATTCAGGAGCTAACTGCTCTTATTAAGCAGGACATTACAACATTGAACTCTGCCGTTGTAGATCTTCAGCTTCTCTGCAACTCTAGAAATGAAAATGGAAACATATCCAGTGATACTACTAGTCATTCAACCACTGTGGTAGATGATCTTAAGAATCGACTGATGAGCACGACAAAAGAATTTAAAGAAGTCCTGACCATGCGAACTGAAAATTTGAAGGTTCATGAGAACAGAAGACAACTATTTTCTTCTACTGCTTCAAAGGAATCTACAAATCCTTTTGTTCGCCAGCGCCCATTAGCATCCAGGTCAGCTTCTGGTGCCCCAAGCGCAGCCCCTCCTCCATGGGCCAAGGCGTCTACATCTTTTTCCAAAGCATCTCCGGGGAAGCAGGTGGATGGGGAGGGTCAACCATTGTTGCAGCAGCAGCAGCAGCAGCAGCAGATGGTTCCATTACAAGATACTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAATGTAGAATCCACCATTCATGAATTGAGCAATATCTTCAACCAGCTGGCAACTCTGGTTTCTGAACAAGGAGAGATTGCTATCAGGATCGATGAAAACATGGACGATACCCTGGCAAATGTGGAGGGAGCACAGGGAGCTTTGCTCAAGTATCTAAGCAGTTCGTGTTTATTTTATGCTGCCTTATCCTTCTCTTATGATTTGGGGAACGCATCAAGTTTTCTACCGTTTGAAGAGCACTGTTTATCGGTCTCTAGAAGGATTTTAACAAGGTTTGAATGCTTTAATGATTGA 2469 45.65 MASQNRPASTLETIENQSEAIKSMSISSIPGTVIKKLKTNLVFQSKWAELNGAMGDLGTYIPIVLALTLSRNINLGTTLIFTGIYNIITGLIYGVPMPVQPMKSIAAAALADPEFGVAEIMAAGILTGGILFVLGATGLMHLVYKLIPLAVVRGIQLAQGLSFTLTAIKYVRYDQNMAKSKSGDAREWFGLDGLILAVVCACFVIVVNGAGEDEHQPEGTENEAQGEAKGGINKEKVRKIIASLPSAFIIFCLGILFLFIRNPKVVKEITFGPSSITIVKITKSQWKKGFIKGTIPQLPLSILNSVIAVCKLSMDLFPAKIFTVTSLSVTVGLMNIVGCWFGAIPTCHGAGGLAGQYKFGGRSGGCVALLGAAKLMLGLVLGSSLAKVLNQFPVGILGVLLLFAGVELAMAARDMNTKEQAFVMLLCTGVSLVGSSAALGFLCAMIFSLRLEGFGSRVCGELQLTALKMAVKTAHSFRDRTLEFQNITERLKKSFSSGTGTTGPSAVSKSEEQRSAVALQSEFNKRASKIGLGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTALIKQDITTLNSAVVDLQLLCNSRNENGNISSDTTSHSTTVVDDLKNRLMSTTKEFKEVLTMRTENLKVHENRRQLFSSTASKESTNPFVRQRPLASRSASGAPSAAPPPWAKASTSFSKASPGKQVDGEGQPLLQQQQQQQQMVPLQDTYMQSRAEALQNVESTIHELSNIFNQLATLVSEQGEIAIRIDENMDDTLANVEGAQGALLKYLSSSCLFYAALSFSYDLGNASSFLPFEEHCLSVSRRILTRFECFND* 823
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 14915132 14926332 - Chy3G061530.1 Chy03g01173 223334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01173 822 Pfam Molybdate transporter of MFS superfamily 290 408 IPR031563 GO:0015098|GO:0015689
Chy03g01173 822 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098|GO:0015689
Chy03g01173 822 SMART tSNARE_6 709 776 IPR000727 -
Chy03g01173 822 CDD SNARE_syntaxin5 717 779 - -
Chy03g01173 822 MobiDBLite consensus disorder prediction 696 710 - -
Chy03g01173 822 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 474 493 IPR021538 -
Chy03g01173 822 Gene3D - 518 769 - -
Chy03g01173 822 SUPERFAMILY t-snare proteins 520 769 IPR010989 GO:0016020|GO:0016192
Chy03g01173 822 ProSitePatterns Syntaxin / epimorphin family signature. 720 759 IPR006012 GO:0005484|GO:0006886|GO:0016020
Chy03g01173 822 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 714 776 IPR000727 -
Chy03g01173 822 PANTHER - 30 447 IPR031563 GO:0015098|GO:0015689
Chy03g01173 822 MobiDBLite consensus disorder prediction 638 659 - -
Chy03g01173 822 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 30 447 - -
Chy03g01173 822 MobiDBLite consensus disorder prediction 636 710 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02027 Chy-Chr1:25130218 Chy03g01173 Chy-Chr3:14915132 5.24E-159 dispersed
Chy03g01173 Chy-Chr3:14915132 Chy10g00436 Chy-Chr10:10415137 7.25E-87 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01173 - - csv:101212057 850.506