Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01190 ATGGGCGGTGATCATAAAGCCATCACTCTCGAGGAGATTAAAAACGAAGCCGTTGATCTGGAGCATATTCCAATAGAGGAAGTGTTTGAACAGTTGAAATGTACACGAGAAGGTCTTACATCAGAGGAAGGAGCCCACCGGCTTCAAGTTTTTGGACCCAACAAACTAGAAGAGAAGAAGGAAAGCAAACTTCTCAAGTTTTTGGGTTTTATGTGGAATCCTTTATCTTGGGTAATGGAAGCTGCTGCCTTAATGGCTATTGTCCTAGCAAATGGCGGTGGAAGACCACCAGATTGGCAAGACTTTGTGGGGATCATTGCTTTACTTTTTATCAACTCTACGATAAGTTTTATTGAAGAGAACAATGCTGGTAACGCGGCCGCCGCTCTCATGGCTGGTCTTGCTCCCAAAACCAAGGTTCTAAGGGATGGTCGTTGGAGTGAGCAAGAGGCTGCTATTCTTGTTCCGGGAGATATTATAAGCATTAAACTTGGAGACATAATACCAGCAGATGCCCGTCTTCTGGAGGGTGATCCTTTAAAAATCGATCAGTCTGCCTTAACTGGAGAATCGCTCCCAGTCACCAAGAACCCCTCAGATGAAGTATTTTCTGGATCTACATGTAAACAAGGTGAAATTGAAGCCGTTGTGATTGCCACTGGTGTGCACACATTTTTTGGCAAAGCAGCTCATTTGGTAGATAGCACCAATCAAGTTGGACATTTTCAGAAAGTTCTTACTGCTATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTAATCGAGCTTATAGTTATGTACCCGATACAACGACGCAAGTATAGAGATGGCATTGACAACTTGTTGGTGCTTTTGATTGGTGGAATCCCTATTGCCATGCCAACCGTGTTATCCGTTACCATGGCCATTGGTTCTCATAGGCTTTCTCAGCAGGGTGCCATTACCAAGAGAATGACAGCCATTGAGGAAATGGCTGGCATGGATGTTCTCTGCAGCGATAAGACAGGAACTCTGACCTTGAACAAACTAACTGTGGATAGAAGCTTGATCGAAGTGTTTGTCAAGGGTGTTGAGAAAGAGTATGTTATTCTTCTTGCGGCCAGAGCTTCTAGAACCGAGAACCAAGATGCTATTGATGCAGCTATAGTAGGAATGCTTGCGGATCCTAAAGAGGCACGAGCAGGAATTAGAGAGGTTCATTTCCTTCCATTCAATCCCGTTGACAAAAGAACTGCCCTTACTTACATCGACTCTAATGGAACTTGGCACCGAGTAAGCAAAGGTGCCCCTGAGCAGATCCTAAATCTTTGTAACTCTAGAGAAGACGTTAGAAGGAAGGTTCATGCAGTGATTGACAAGTTTGCAGAGCGTGGACTTCGTTCGCTGGGTGTTGCAAGACAGGAAGTACCTGAAAAAACAAAAGATAGCCCTGGAGGACCGTGGCAGCTTGTTGGTTTGTTGCCTCTATTTGATCCTCCTAGACACGATAGTGCAGAAACCATAAGAAGAGCTCTGAACCTTGGAGTAAATGTGAAGATGATTACTGGGGATCAACTTGCCATTGCCAAGGAAACTGGGCGTAGACTTGGTATGGGAACAAATATGTACCCTTCTTCATCATTACTTGGTCAAGACAAGGATGAATCTATTGCTTCACTTCCTGTGGATGAGTTGATTGAGAAGGCAGATGGGTTTGCTGGAGTATTCCCAGAACACAAATACGAAATTGTGAAAAGGCTGCAAGAAAGAAAACATATATGTGGAATGACCGGAGATGGTGTTAATGATGCTCCTGCTTTAAAGAAGGCAGATATCGGAATTGCTGTTGCGGATGCTACCGATGCTGCCAGAAGTGCTTCAGATATTGTCCTTACAGAACCAGGATTGAGTGTGATTATTAGTGCGGTGCTAACTAGTAGGGCTATTTTTCAGAGGATGAAGAACTACACGATTTATGCCGTTTCAATTACCATTCGTATAGTGTTTGGCTTCATGTTCATTGCCTTGATTTGGAAGTTTGATTTTGCTCCCTTCATGGTTTTAATAATAGCCATTCTGAATGATGGAACAATTATGACAATTTCAAAGGATCGAGTAAAGCCATCTCCACAACCTGATAGTTGGAAACTGAAGGAGATTTTTGGAACTGGAATTGTGCTTGGAGGATACATGGCACTAATGACGGTGTTATTCTTTTGGGCTGTGAAAGATACAAACTTCTTCTCAGAAAAATTCAATGTGAAATCCTTGAAAGATAGTCCTGAAGAATTGATGGCAGCATTGTATCTACAAGTAAGCATAATAAGCCAAGCACTAATCTTCGTGACAAGGTCACGCAGCTGGTCATACATGGAACGACCAGGACTCCTCCTAGTGGGTGCATTCATAATAGCTCAGCTGGTGGCCACAGTGATAGCTGTATATGCGAATTGGGGTTTTGCAAGGATAAAAGGAATGGGATGGGGATGGGCTGGAGTTATATGGCTCTACAGCTTGGTAACATACATTCCTTTGGACATTTTGAAATTTGGAATCAGATATGCTCATAGTGGGAAGGCTTGGGACACACTTCTGGAGAACAAGACTGCATTCACAACGAAAAAGGATTATGGAAAAGAAGAGAGAGAAGCACAATGGGCAGCAGCACAGAGGACATTACATGGACTACAACCACCTGAGAACTCCAATCTCTTCCCTGAGAAAAGTAGTTATAGAGAGCTTTCTGAGATTGCTGAGCAAGCCAAACGTCGTGCTGAGGTTGCAAGGTTTGTTCTTTTTAAAGCTCTTTTTGTCTGTTGTTTTCAAAATTTATGGTTAGTTCGTCCAAAGACTAAGAGTAAAGAGTGGTGGTGGGGTGTGGGGTGTGGGTGCAGGCTCCGAGAATTGCATACACTGAAGGGACATGTTGAATCGGTGGTGAAGCTGAAGGGACTGGACATTGATACAATCCAACAACACTATACAGTTTAA 2976 43.25 MGGDHKAITLEEIKNEAVDLEHIPIEEVFEQLKCTREGLTSEEGAHRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAALMAIVLANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGILIELIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRSLIEVFVKGVEKEYVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGTWHRVSKGAPEQILNLCNSREDVRRKVHAVIDKFAERGLRSLGVARQEVPEKTKDSPGGPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFGTGIVLGGYMALMTVLFFWAVKDTNFFSEKFNVKSLKDSPEELMAALYLQVSIISQALIFVTRSRSWSYMERPGLLLVGAFIIAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSLVTYIPLDILKFGIRYAHSGKAWDTLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPENSNLFPEKSSYRELSEIAEQAKRRAEVARFVLFKALFVCCFQNLWLVRPKTKSKEWWWGVGCGCRLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 992
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15048866 15056669 + Chy3G061700.1 Chy03g01190 223351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01190 991 SFLD C1.7: P-type atpase like 315 643 - -
Chy03g01190 991 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Chy03g01190 991 CDD P-type_ATPase_H 38 845 IPR006534 GO:0008553|GO:0016021|GO:0120029
Chy03g01190 991 SUPERFAMILY Calcium ATPase, transduction domain A 136 233 IPR008250 -
Chy03g01190 991 Gene3D - 330 629 IPR023214 -
Chy03g01190 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 851 IPR023298 -
Chy03g01190 991 PANTHER CALCIUM-TRANSPORTING ATPASE 5 936 - -
Chy03g01190 991 Pfam Cation transporter/ATPase, N-terminus 22 85 IPR004014 -
Chy03g01190 991 Pfam E1-E2 ATPase 135 312 - -
Chy03g01190 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 567 682 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 105 352 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 Gene3D - 958 991 - -
Chy03g01190 991 Gene3D - 904 932 - -
Chy03g01190 991 Gene3D - 136 220 - -
Chy03g01190 991 SFLD p-type atpase 315 643 IPR044492 -
Chy03g01190 991 PANTHER PLASMA MEMBRANE ATPASE 5 936 - -
Chy03g01190 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 335 341 IPR018303 -
Chy03g01190 991 SUPERFAMILY HAD-like 329 639 IPR036412 -
Chy03g01190 991 PRINTS H+-transporting ATPase (proton pump) signature 592 608 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 PRINTS H+-transporting ATPase (proton pump) signature 449 467 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 PRINTS H+-transporting ATPase (proton pump) signature 564 580 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 PRINTS H+-transporting ATPase (proton pump) signature 764 785 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy03g01190 991 Gene3D - 98 819 - -
Chy03g01190 991 Gene3D - 345 492 IPR023299 GO:0000166
Chy03g01190 991 Pfam haloacid dehalogenase-like hydrolase 329 606 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 183 197 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 509 519 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Chy03g01190 991 PRINTS P-type cation-transporting ATPase superfamily signature 487 498 - -
Chy03g01190 991 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 38 810 IPR006534 GO:0008553|GO:0016021|GO:0120029
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01190 Chy04g00299 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02093 Chy-Chr2:25241361 Chy03g01190 Chy-Chr3:15048866 0 dispersed
Chy02g02238 Chy-Chr2:26446195 Chy03g01190 Chy-Chr3:15048866 0 dispersed
Chy03g01190 Chy-Chr3:15048866 Chy05g00892 Chy-Chr5:13196107 0 dispersed
Chy03g01190 Chy-Chr3:15048866 Chy04g00299 Chy-Chr4:2698580 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01190 K01535 - csv:101213505 1805.03