Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01199 ATGACGGCACCGGTGTCGGTTGATGGGAAAGGGAAGAAGAATATTGAGAATTTGGTGTCTGCTACTAGGTCATTGAAGGCTAGCTTAGAGAAATCTAGTGCTTTAGGGTTTTCTTTGCAGAAAGCTGGGCCGAGATTGGAGGAGATTAGGCAAAGATTGCCGACTTTAGAAGCAGCGGTTCGGCCTATTCGTGCTGACAAGGAAGCCCTTGTTGCCGTCGGTGGCCATATAAATCGGGCTGTTGGCCCTGCCGCGGCCGTGCTTAAGGTTTTCGATGCAGTTCATGGCCTTGAAAAATCTCTATTATCGGACCCGCGGAATGATCTTCATGGGTATTTGTCTGTGTTGAAACGTATGGAAGAGGCATTGAGGTTTTTGGGAGATAACTGTGGACTGGCAATCCAGTGGTTGGAGGACATTGTTGAGTATTTGGAAGATAATACTGTTGCTGATGAGAAATATCTAGCGAGTTTGAAGAATTCATTGAAAAATCTTAGGGATTTGCAGAGTGATGAAGGGAGGACTCGGCTTGATGGGGGCCTTCTGAATGCTGCTTTAGATAAACTCGAGAACGAGTTTAGGCGGCTTTTGACGGAGCACAGTGTACCTCTTCCAATGTCTTCTTCGGCGTCTTCAGGTGAACAAGCTTGCATTGCTCCATCCCCATTGCCTGTGACTATCATTCCGAAATTGCAAGCCATTCTTGGGAGATTGATTGCTAATAAACGACTCGAGAGTTGCATATCGATTTATGTTGAAGTTCGTAGTTCTAATGTTAGGGCTAGTTTGCAGGCTCTTGATTTGGATTACTTGGAGATATCTGTTTCTGAGTTCAATGATGTGCTGAGCATCGAAGGGTACATTGCAAAATGGGGAAAGCATTTGGAGTTTGCAGTGAAACACTTGTTTGAGGCCGAGTTCAAGCTTTGTAATGACGTTTTCGAGAGGATTGGATTGGATGTTTGGATGGGGTGTTTTGCAAAGATAGCAACTCAAGCAGGTATTCTTGCATTTCTTCAATTTGGGAAAACTGTAACAGAAAGCAAGAATGATCCTATTAAGCTACTGAAGTTGTTGGATATATTTGCATCCTTGAACAAACTGAGACTAGACTTCAATAGGCTTTTTGGCGGGGCGGCCTGTTTGGAAATTCAAAACTTGACTAGGGATCTCATTAAGCGGGTTATTGATGGTGCGGCCGAGATTTTCTGGGAACTTTTAGTTCAGGTGGAGCTGCAGAGGCAAAATTCTCCACCTTTAGATGGGGGAGTTCCACGATCGGTTAGCTTCATTATTGATTACAGTAACAAACTACTCAGTGACGATTATCGGCCGATCTTGACCCAGGCCCTCGTCATTCACCGAAGTTGGAAGAAAGAAAAGTTCCAAGAGCGTCTACTTGTCAGTGAGGTAACGAACCTTGTTAAAGCTATTGAGCATAATCTTGAAACTTGGATAAAGGCTTATGAAGATTCTACCTTGTCAAACTTTTTCGCTATGAACAATCATTGGCATCTATACAAGCACCTCAAAGGAACAAAAGTCGGAGAACTAATGGGAGATAAACTAAAGGAACATGAACAATACAAGGATTTCTATGCTGCAGTTTTCTTGAGGGAGAGCTGGACTAAACTTCCTAGCCATTTAAGCAGAGAGGGTTTGATAATGTTCTCGGGTGGCCGAGCTACTGCTCGTGATCTTGTCAAGAAACGTCTAAAGACATTCAATGAAGCTTTTGAAGACATGTATAAGAAGCAGTCAAACTGGGTTATGACTGACAAAGAGTTGAGGGAGAAGACATGTCAACTTATAGTTCAAACCATCGTACCCGTTTATCGCAGTTACATGCAGAATTACGGCCCCTTGGTCGAGCAAGACGCGAGTTCCAGTAAGTATGTGAAGTACACCGTGCAGAATCTGGAGAAAATGTTACTGTCCCTATTTCAGCCAAAGCCACTTAGGCACAGTAGTCTTAAAGTTAGGCAGACCAGTGGGAAATTCAGCAATGGCGCAGCAGATCATCGTCGTTCCAACTCCATGGTTATGTAA 2049 43.78 MTAPVSVDGKGKKNIENLVSATRSLKASLEKSSALGFSLQKAGPRLEEIRQRLPTLEAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLHGYLSVLKRMEEALRFLGDNCGLAIQWLEDIVEYLEDNTVADEKYLASLKNSLKNLRDLQSDEGRTRLDGGLLNAALDKLENEFRRLLTEHSVPLPMSSSASSGEQACIAPSPLPVTIIPKLQAILGRLIANKRLESCISIYVEVRSSNVRASLQALDLDYLEISVSEFNDVLSIEGYIAKWGKHLEFAVKHLFEAEFKLCNDVFERIGLDVWMGCFAKIATQAGILAFLQFGKTVTESKNDPIKLLKLLDIFASLNKLRLDFNRLFGGAACLEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNSPPLDGGVPRSVSFIIDYSNKLLSDDYRPILTQALVIHRSWKKEKFQERLLVSEVTNLVKAIEHNLETWIKAYEDSTLSNFFAMNNHWHLYKHLKGTKVGELMGDKLKEHEQYKDFYAAVFLRESWTKLPSHLSREGLIMFSGGRATARDLVKKRLKTFNEAFEDMYKKQSNWVMTDKELREKTCQLIVQTIVPVYRSYMQNYGPLVEQDASSSKYVKYTVQNLEKMLLSLFQPKPLRHSSLKVRQTSGKFSNGAADHRRSNSMVM* 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15123967 15126015 - Chy3G061790.1 Chy03g01199 223360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01199 682 Pfam Exo70 exocyst complex subunit 290 645 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy03g01199 682 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 14 671 - -
Chy03g01199 682 SUPERFAMILY Cullin repeat-like 87 648 IPR016159 -
Chy03g01199 682 Gene3D Exocyst complex component Exo70 136 656 - -
Chy03g01199 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 671 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02114 Chy-Chr1:25847708 Chy03g01199 Chy-Chr3:15123967 0 dispersed
Chy03g01199 Chy-Chr3:15123967 Chy03g01600 Chy-Chr3:17959302 5.75E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01199 K07195 - csv:101207478 1310.43