Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01203 ATGTGGAATCAGAAGCAATCCGTTGGTAAGGAAAAGAAAGAGCTATCCACTGCCAATCAATTGGTGGGTATTGCCATTGATAAGGATAAAGGAAGTCAACTTGCTCTTAAATGGGCCACTGAGAATCTCCTTGTAAAAGGCCAAACTGCCATTCTCATCCATGTTAAACTCAAATCTTCCACTTATCCTGGCTCTTCCATGGCTTCCCCTAAGGTGATGTCGGCGTCTGACGCCGGCAATGTCAATGGCAATGTTTTGGTAAGCAAGGATATCGATCCGATCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTTGTTGAAGATTTAGATGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTCGTCGGTTCCACATCTAAAAGTAGCTTCTTGAGATTGAAGACAACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAACGAAAATCCAAACTATGCGATCAGCCTCACGTCCTGCTCCGGTTTCATCTCCTCTTCGAAGTTTATTGCTGAGCCAAACCGTTGTCAAATCACATTCAGCTGAGTCACTAGTTCCTCAGATTCAAACTATGAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCACAGGACAACATCGAGTTCAGGTCGCCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCTCTCTGCCAGATACTGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGACCGATTATTCCCTACATTGTTTGACAATGCGGATACCGGAAGGGTTCCCCCACGACTGTCCAGTGGCAATGATGCTGAACTATATAATAGCTTTGAGTCACAACAATTTGGACGTAAATCAGTGGATGGACGCAAATCAGTGGATGGGCGCAAATCAGTGGATGTAAACTATCCACCTGAATTTTTATCGGTTTTCTCAGAAAGTGACAGATTGTCAACTTCCTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGTTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCCAAGCAAAAGGCAATAGAGCTTCAGCGATGGAAATCTGAGGAGGAACGAAGAATAGAGGAGGCAAGACTCGCAGAGGAAGCTGCTTTAGCGATGGTTGAGCAGGAAAAGGCAAAATCTAGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATCGCTGAGTTGGAAGCACAGAAGAGAATTAATGCAGAAAAAAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCTAACAATGATGTCAGGTATCGAAAGTACTCGATCGAAGAGATTGAAACTGCTACCCAGTTCTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGCTATGGGCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATTAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTCGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCCGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGGAGCTTGGATGATTGCCTCTTTCGCCGGGGACAAAATTCAAAACCTCTTTCTTGGCAGCGTAGATTTAAAATTGCAGCTGAAATTGGCACTGCGTTGTTGTTCCTCCATCAGACTAAACCTGAGCCTCTTGTGCATCGTGATTTGAAACCGGCCAACATCTTGCTCGATCGTAATTACGTTAGCAAGATTAGCGATGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCAAACAGTGTGACACAATATAGAATGACTTCAACTGCCGGCACATTTTGTTATATCGATCCCGAGTATCAACAAACCGGCATGCTCGGTGTAAAGTCCGACATATATTCTTTGGGAATAATGTTTTTGCAGATGATTACAGCAAGGGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGCGAAAGGGACCTTGTCCGAAATTCTTGATCCATCCGTTACCGATTGGCCAGCTGAAGAAACGTTGTGCTTTGCTGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGATCGACCAGATCTTGGTAAGGTTGTTCTCCCAGAACTCATCAGATTTCAATCAGTAGCCGAAACCAGCATATTCGTTCCGCGGATGGACAGTGTTAACAGTCCTGATTTCAGCAGCAGTCAGGCTTCTATGAGAAGAGACAGCGATTGTTTTTCCTCACAATCTAACGATAGCTTTGGAGTCCTATCGCGCTCGGAGTCATAG 2415 44.84 MWNQKQSVGKEKKELSTANQLVGIAIDKDKGSQLALKWATENLLVKGQTAILIHVKLKSSTYPGSSMASPKVMSASDAGNVNGNVLVSKDIDPITRDLFLPFRCFCTRKDIFCKDIVVEDLDVAKALIEYVTQAGIENLVVGSTSKSSFLRLKTTDIPGSVVKGAPDFCNVYVISRTKIQTMRSASRPAPVSSPLRSLLLSQTVVKSHSAESLVPQIQTMRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSLPDTDISFVSSGRPSVDRLFPTLFDNADTGRVPPRLSSGNDAELYNSFESQQFGRKSVDGRKSVDGRKSVDVNYPPEFLSVFSESDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKSEEERRIEEARLAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIEEIETATQFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRGQNSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQMITARAPMGLTHHVGRAIAKGTLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSVAETSIFVPRMDSVNSPDFSSSQASMRRDSDCFSSQSNDSFGVLSRSES* 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15140357 15144980 - Chy3G061830.1 Chy03g01203 223364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01203 804 PANTHER OS02G0152300 PROTEIN 13 796 - -
Chy03g01203 804 Coils Coil 412 467 - -
Chy03g01203 804 Coils Coil 345 372 - -
Chy03g01203 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Chy03g01203 804 Gene3D Phosphorylase Kinase; domain 1 464 558 - -
Chy03g01203 804 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 13 796 - -
Chy03g01203 804 Gene3D Transferase(Phosphotransferase) domain 1 559 760 - -
Chy03g01203 804 Pfam Universal stress protein family 22 166 IPR006016 -
Chy03g01203 804 SMART serkin_6 486 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01203 804 Gene3D HUPs 21 174 IPR014729 -
Chy03g01203 804 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 24 174 - -
Chy03g01203 804 Pfam Protein kinase domain 488 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01203 804 CDD STK_N 21 176 - -
Chy03g01203 804 ProSiteProfiles Protein kinase domain profile. 486 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01203 804 MobiDBLite consensus disorder prediction 771 804 - -
Chy03g01203 804 SUPERFAMILY Protein kinase-like (PK-like) 470 746 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00710 Chy-Chr1:5199310 Chy03g01203 Chy-Chr3:15140357 0 dispersed
Chy03g00674 Chy-Chr3:9312755 Chy03g01203 Chy-Chr3:15140357 1.58E-29 dispersed
Chy03g01203 Chy-Chr3:15140357 Chy05g00834 Chy-Chr5:11953629 0 dispersed
Chy03g01203 Chy-Chr3:15140357 Chy04g00284 Chy-Chr4:2522498 2.61E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71138 PF00069 Pkinase 1.30E-38 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01203 - - csv:101214468 1451.03