Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01222 ATGAAGCGTAGCTCCTCCGAGTTGGCTCTCGAAGAGTTCCTCAGAATAGCCGCCGTCATCTCTAACGACGACGCTACCGACCCCGAAGACGACGTCTTCAAAATAGACGACCAACAAATCATAATTAGAAGCCCTAAACGAGGCAAGAACTTTCAAGATTCCCCCGATGCCACCTACTTCTTCGGCGATAACGATTTCAGTTATTTCCTCGTCAAGAATAATCGGGAGATAATGGACGCAATTGTTAACTGTGGAGGTGGGCTGGCGGAGGCTCCTTTACGGTCACAGAATCTCACTCCTAAGCGTTCAAGCTTTTCACCCACTTTAGATTCCCAATCCTCTATCGTGGGCAGCCCAACATCAGCCAGTAATTTGATGGGCGGAGAACACCAAAGAGGAAACAATAGTGGGTCCTCTGAAGATCAATCTGATGATGAAATTGAAGCTGGTTCTTGTGACCATAGTACTGACGCTCTTGCTTTGAAGAGAATCAGAAGAATGATCTCTAACAGGGACTCAGCTAGAAGATCAAGAAGAAGAAAACAAGCTCATTTGGCTGAACTCGAGAACCAGGTAAAACAGTTGAAAGGCGAAAATGAAACCTTGTTCAACCAACTTCTAGATGCTAGCCAACAATATCGTGATGCTAATACAAACAACCGTGTACTTAAATCAGACGTAGACGCATTAAGAGCTAAGGTCAAATTGGCTGAAGATACACTAGCTAGAGGCTCAATGACATGCAGCTTGAATCAGCTGTTACAGAGTCATTTGAGCACGCCGCAGCCAATAACGGCACTACGACGAATGCCAACATCACCACTCGGTTTTTCTGGAGACGAAGTTTCTTATTCCGGTGTGACAATGTCAGGGCAGAACCCGACGGCGGCGGGAATGCCGAACTCGGAGATGCATATGAAAACTGGAATGGGTAGTGAGGCTGTTAGTTGTATTTCTGGGATTTGGCCTAGAAATTAG 978 46.01 MKRSSSELALEEFLRIAAVISNDDATDPEDDVFKIDDQQIIIRSPKRGKNFQDSPDATYFFGDNDFSYFLVKNNREIMDAIVNCGGGLAEAPLRSQNLTPKRSSFSPTLDSQSSIVGSPTSASNLMGGEHQRGNNSGSSEDQSDDEIEAGSCDHSTDALALKRIRRMISNRDSARRSRRRKQAHLAELENQVKQLKGENETLFNQLLDASQQYRDANTNNRVLKSDVDALRAKVKLAEDTLARGSMTCSLNQLLQSHLSTPQPITALRRMPTSPLGFSGDEVSYSGVTMSGQNPTAAGMPNSEMHMKTGMGSEAVSCISGIWPRN* 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15325165 15329417 + Chy3G062020.1 Chy03g01222 223383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01222 325 SUPERFAMILY Leucine zipper domain 161 209 IPR046347 GO:0003700|GO:0006355
Chy03g01222 325 MobiDBLite consensus disorder prediction 98 152 - -
Chy03g01222 325 Gene3D - 161 217 - -
Chy03g01222 325 Coils Coil 171 240 - -
Chy03g01222 325 PANTHER BASIC LEUCINE ZIPPER 63 1 323 - -
Chy03g01222 325 SMART brlzneu 158 222 IPR004827 GO:0003700|GO:0006355
Chy03g01222 325 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 160 223 IPR004827 GO:0003700|GO:0006355
Chy03g01222 325 MobiDBLite consensus disorder prediction 98 140 - -
Chy03g01222 325 Pfam bZIP transcription factor 160 206 IPR004827 GO:0003700|GO:0006355
Chy03g01222 325 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 165 180 IPR004827 GO:0003700|GO:0006355
Chy03g01222 325 PANTHER BASIC LEUCINE ZIPPER 9 1 323 - -
Chy03g01222 325 CDD bZIP_plant_GBF1 180 214 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01222 Chy-Chr3:15325165 Chy05g01192 Chy-Chr5:16400995 1.38E-24 dispersed
Chy03g01222 Chy-Chr3:15325165 Chy02g00819 Chy-Chr2:5182341 7.21E-12 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17716 PF00170 bZIP_1 1.60E-14 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01222 K25784 - csv:101210908 614.764