Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy03g01230 | ATGGCGTCCGGTTCTCCTCCTTCCCGCATCGACCAGTTCTATGCTTCAAAGAAAAGGAAACCTCTTACTCCCGGGCTGAAGTCTGGGAGTTACGACACGGATGGAAAAAAGGCACTTGAAGGGTCGCCTGGTGCTAAAGGTACGTTGGACAATTACCTGGTGATTTCACAGGACCATGGCAATTCTGATAACCCATCACATTCAGTTCGAGAAAACTTGTCTGCGCAAAACTTGGTAAAGAGAAACTTATTGTTGAAAATTAATAGCTCCTCTAGAAATGAACACGGTGAAACAACTTCGTTGAGAGGGTGTGACAAGAAAAGAACTCTGGCGGACTCATTCGAGACAAGAAGTTCAACAGTTAAATCTACGGCAAGTGATTGGGGTGTCGCACCCTGCACGGAGAAACCAGAGCTTAAGCAGTTTGCAGCTGATTTCCTGTCTCTGTACTGCAGCAATGAACTACAGACAACTGTTAGCTCGCCAGTAGAGCAAAAAGTGACTTTTCTAAAGCGGCACTCCAGTCCATCTCATCTAGAGGGGGAGGCTAAATTACCGAAGAAGATGCATTCTATTGTGGGTCCATCAAATGCCGAAGGTGAACCTGATTCCTCAAATGCATTGAGTGAGGGAAACAAGGAGTCCGATTTTGTTGTTGAAACTGGGGATACTGTCAGTCATCATCCTGCTGTGCTCAAGGCATGCATGCAGAAATGTAATCAAACTCCTACATCACCTTATTGTTTGGCTGAATGCAAAACACCAGGCTTGTCAACTGCCACTACATTTATTCGTCAGACTCCCAAGTCCGGAAGCTCGACATTTTCTCCTGGAGAAGCTTTCTGGAAAGAAGCAATTGTGTTTGCAGATGGTTTATGTGCTCCAAGCATTGCCCTTACCAATTGTGATGCTGAAGGAGCTAATCTTGTAGAGAGTCAGAGTAATACGAAGAAACTTCCTATACCAGAGGAACCTGCTCAGAAAAGGTTAAAAGGACAGTTTGGTGGAGGCAGTGGTGGAGTCCGGCTTGGGGAACCTGGTGCTTCCATAGTTTCATTGAGGAGTGATTTAAAAGAGTTAGATAGAGTAGTGTCTTCACTACCAGTTAAGCATTTTGACTTCTCGGCTGATGATAAAAACTTGGATGACAGTACATCACCTTGTTGTGCTTCAAATGAATCTAAAGTTAATGCATATGACCTTAATGAGCAGTCTGATCGTTGTTATACTACTCACGTTAGTCTACCAAAGCATAATGATAAGACCCGTGACAGTGATTCTCTTACAAAAGAGAAGATACAAGAAACAAAAGTAACTTCCTCTGTTCTGGTAGTGAATGAAGTGAAATTAAACATATTTAGCCCCTCTGATAGTATCACATCTGACACAGCGGCTCATGAACTTAGGGCTTCTACTATTCATGATTCTAGAGACGAAATGACACCTTCAAGTTCAACAAGACACAAAGATTGGCTGGATCTAAGTTGCTGGCTACCTCCTGAAATTAGCAGCATTTATAAAGAGAAAGGAATAACAAAACTACATCCTTGGCAGGTTGAATGCCTTAAGGTAGATGGTGTCTTGCAGAGAAGAAATCTTGTTTATTGTGCATCCACCAGTGCTGGAAAAAGTTTTGTTGCAGAGATTTTAATGTTAAGGCGGGTAATTTCTACTGGAAAGATGGCACTTCTTGTACTTCCATATGTGTCAATTTGTGCAGAAAAGGCCACACATCTTGATGTTCTTCTTGAACCTCTGGGTAAGCATGTGCGTAGTTATTATGGAAATCAAGGTGGTGGTACGCTTCCTAAGGATACTTCTGTGGCCGTTTGTACGATTGAGAAGGCAAACTCTTTAATAAACAGATTGTTGGAGGAGTGTCGTTTGTCGGAAATTGGGATTATCGTGATAGATGAATTGCACATGGTTGGAGATCAGACGAGGGGGTATCTTTTGGAACTATTGTTGACTAAACTTCGTTATGCTGCTGGGGAAGGTAATTTAGATTCTAGTAGTGGTGAGAGTTCTGGAACTAGTAGTGGTAAGTCAGACCCTGCTCATGGTATTCAAATAGTTGGCATGAGTGCGACCATGCCAAATGTTGCAGCTGTTGCAAATTGGCTTCAGGCAGCCTTGTACCATACTGATTTTCGACCTGTTCCTTTAGAGGAGTACATTAAAGTTGGGAATACCATTTATAATAAAAGTTTGGACATCGTTAGAACAATCTCAAAAACAGCTAATCTTGGTGGTAGGGATCCAGATCACATTGTAGAATTATGTAATGAGGTAGTTGAAGATGGACACTCAGTATTGATCTTTTGCTCCAGTCGGAAAGGATGTGAATCAACAGCAAAACATGTGTCAAAATTCCTCAAGAAGTTTTCTGTCAAAATTCAAAACGAGAACAGTGAGTTTACAGACATTTTTTCAGCAATTGATGCACTGAGAAGATGTCCTTCTGGACTGGATCCTGTATTAGAGGAAACCTTTCCATCTGGTGTTGCCTACCATCATGCCGGCCTTACTGTTGAGGAGAGAGAGGTTGTTGAAACTTGCTACCGCAAGGGTCTTTTACGTGTTTTAACTGCTACATCTACCTTAGCTGCTGGAGTTAACCTGCCAGCTCGAAGGGTAATTTTCCGACAACCCAGGATTGGACGAGACTTTATCGATGGTGCAAGGTACAGACAAATGGCTGGTCGGGCTGGCCGGACTGGGATTGATACCAAGGGGGAAAGTGTACTCATCTGCAGACCAGAAGAGGTTAAAAGAATTAATGAACTTCTTAACGAGAGCTGTCCACCTTTGCAATCATGTTTGTCCGAAGATAAGAATGGAATGACACATGCTATTTTAGAAGTTGTGGCTGGAGGGATTGTTCAAACTGCAGCTGATATTCATCGATATGTAAGGTGTACTCTTCTGAATTCTACTAAACCATTTCAAGACGTGGTTAAATCAGCGCAGGAATCCCTTCGGTGGTTATGCCATGGAAAATTTCTCGAATGGAATGGGTATACCAAGCTGTATAGTACCACGCCTCTTGGACGTGCATCGTTTGGAAGCTCTCTTAGTCCAGAAGAATCACTTATTGTCTTGGATGATCTTTCAAGGGCCCGAGAAGGATTTGTGCTTGCATCTGATTTACATTTGGTGTACCTAGTCACGCCGATCAATGTTGATGTTGAGCCAGATTGGGAGTTATATTATGAACGGTTTATGGGCTTGTCTTCTCTTGACCAGTCGGTTGGAAATCGAGTTGGAGTTACAGAACCATTTTTGATGCGTATGGCACATGGTGCACCTGTTCGACGGGCAAATATCTCAAGACGTACCAAGCGTGATGAACATGTGGGTGTTTATGGTGACAGACCTTCAGAGGAGCAAACTATTCGAGTGTGTAAACGATTTTATGTGGCCCTCATCTTGTCAAGACTTGTTCAGGAAACTCCCATTCCTGAAGTTTGTGACGCTTTTAAAGTTGCCAGAGGAATGGTTCAAGCATTACAAGAGAGTGCTGGAAGGTTTGCATCTATGGTCTCTGTATTTTGTGAGAGGCTTGGATGGCACGATCTGGAAGGTCTGGTAGCCAAGTTCCAAAATCGTGTTTCATTTGGAGTTAGAGCAGAGATTGTTGAACTTACTACTATTCCTTATGTTAAGGGTTCTCGAGCCAGAGCACTCTATAAAGCTGGTTTGCGGACACCTTTAGCAATTGCAGAAGCCTCTGATGCTGAATTAGTTAAAGCTCTTTCTGAGTCTGCGTCATGGACTACAGAAGAGAGTACAGCACAAAAACGGATGCATGTTGGATTAGCTAGGAAGATCAAGCATGGTGCTCGTAAAGTTGTTCTTGATAAAGCTGAAGAGGCAAGGATTGCTGCATTCTCAGCTTTTAAATCGTTGGGGTTTACTGTGCCACAAATTTCTCATCCCCTGTCAGCAAGTGCAGATAGAAATATAACAGCACAAGTGGCTGTTAGCACCCAACAAATGGAGCGTGTTTTAACTTTGTCATGTGTTGGAGGAACTTCCAGTTCTGAAAAATTCGTTGGCAAGAACCCCAGTGAAACAGGGGCAATTTCTATTGATGTAAAACAGTCCGATTCTGGTGTTAATCCTCCAGTGAATGCTGAAGGGTCTGCAATCCAAGATTCAAATACTGTTGGTGAATGTGCGGGAAAGGTAGATGTTGCAATCTCTAGTCACCTGGAAAGAATTACTGATAAAGATGCTCAGAGGGAACAACATAGTAGTAAGTTTTTACATTTGCTAAAAAGAGACGGTTCTTCCATGAAAGGACCTATCCAGGCAGCTAGTACATCTGGCGGATTTGAATCTTTTTTGAATTTGTGGGATGCTAGCCAGGAATTTTATTTTGATCTCTATTACACCAAACGTTCTGAAGTGAACTCTGTCGTCCCTTTTGAGTTACATGGAATAGCCATCTGTTGGGAAAATTCTCCCGTGTATTATGTGAACATTCCAAAGGATTTGTTGGGGCCCAAGAGTGGAAAAGGTCTTTGTCCGGATGATAGCATATCTGGTGATCAGGTAGATGTTTCACAAAACGAGCATTGGTTTGAGATGATTGAAATGAGATGGAAAAAGATCAATGAAATATTTACGAAGAAAAATGTTAGAAAGTTTGCATGGAATTTGAAAGTTCAGGTTCAGGTACTTAAATGTCCTGGAGTTTCCATCCAGAAATTGGGTTTCCTGAATTCTGCTCGACGTAATATGGGCCTTAAACTTGTAGACGGTTCATACTTAGTGTTGTCCAGAGTTCACATGAGCAATGTAATTGATATGTGCATTGTAGCCTGGATTCTTTGGCCAGATGACGAGAGAAATTCAACCCTGAACCTGGAGAAGGAAGTCAAGAAAAGATTATCTGGTGAAGCTGCTGCTGCTGCTAACCGGAATGGCCAGTGGAAGAATCAGTTGAGAAGAGTAGCCCATAATGTCTGCTGTCGGCGTGTTGCACAGACACGAGCACTATGTTCTGTTCTATGGAAGCTAATAATTTCTGAAAAGCTCTTGGACGCTCTCAACAATATAGAGATTCCACTGGTAGGTATTCTTGCTGATATGGAAACCTGGGGTATAGGTGTTGACATGGAGGGATGCATTCGAGCCCCTTATAGGCTAGCTGGCATGACCTTCTCCCTGTACGCAGCAGCAGATATTGCTAATGTTCTATATGGACATTTGAAGCTCTCTATTCCAGAAGGGTTCAACAAAGGAAAACAACATCCAAGTACTGATAAACATTGTTTGGACTTGCTGAGGAATGAACACCCTATTGTTCCAGTCATTAAAGAGCACCGGACGTTGGCAAAGCTCTTTAACTGTACTTTGGGATCCATTTGCTCGTTAGCTAAGCTATCTGCAAGGACACAGAAGTATACACTACATGGTCATTGGCTTCAAACATCCACAGCCACTGGTCGGCTTTCCATGGAGGAGCCTAATCTTCAGTGTGTTGAGCATGCGGTAGAATTCAAAATGAATGAAGATGATGTTGATCATTGTAAAATTAATGCTCGTGATTTCTTCATCTCTACTCAGGAAAATTGGCTGCTCTTATCGGCAGATTATTCTCAGATAGAGTTGCGGCTGATGGCACATTTTTCAAAAGACTCCTTACTGATTGAACTTCTCAGTATACCTCATGGGGATGTGTTCACTATGATTGCTGCTAGATGGACAGGGAAGACAGAAGACTCCATTGGATCTCATGAGCGAGATCAAACCAAAAGGTTAGTATATGGAATTCTTTATGGAATGGGCGCCAAATCACTTTCATTACAACTGGAGTGTAGTAGAGATGAGGCTGTGGAGAAAATTCAAAGTTTCAAGAGTTCTTTCCCTGGCGTGGCTTCATGGCTTCATGAGGCGGTCGCATTTTGCCGTCAGAAGGGGTATGTTGAAACTCTTAAAGGTAGAAGACGCTTCTTGTCAAAAATTAATTCTCCTATTAGCAAAGAGAAATCGAAAGCACAGAGACAAGCTGTGAATTCAATTTGTCAGGGTTCAGCTGCTGACATAATTAAATTGGCTATGATCCACGTTTATTCGGTCATTGGAACGGACTTTCCAGATCTTACAGTGTTAACTGCAGCTAACTCCAATATATTGAGGGGTCACTGCCGCATTGTATTACAGGTGCATGATGAGTTAGTGCTAGAAGTGGACCCTTCCGTCGTCAAGGAGGCAGCATCCTTGTTACAGAAGAGCATGGAAAATGCTGCCTCCCTTCTTGTTCCTTTGCAAGTCAAACTGAAAGTTGGACGAACATGGGGTTCTTTGGAGACATTCTTGCCTGATAACTTCCAGATTGAAGCTCTTGCACCTGGATCTTGA | 6369 | 42.61 | MASGSPPSRIDQFYASKKRKPLTPGLKSGSYDTDGKKALEGSPGAKGTLDNYLVISQDHGNSDNPSHSVRENLSAQNLVKRNLLLKINSSSRNEHGETTSLRGCDKKRTLADSFETRSSTVKSTASDWGVAPCTEKPELKQFAADFLSLYCSNELQTTVSSPVEQKVTFLKRHSSPSHLEGEAKLPKKMHSIVGPSNAEGEPDSSNALSEGNKESDFVVETGDTVSHHPAVLKACMQKCNQTPTSPYCLAECKTPGLSTATTFIRQTPKSGSSTFSPGEAFWKEAIVFADGLCAPSIALTNCDAEGANLVESQSNTKKLPIPEEPAQKRLKGQFGGGSGGVRLGEPGASIVSLRSDLKELDRVVSSLPVKHFDFSADDKNLDDSTSPCCASNESKVNAYDLNEQSDRCYTTHVSLPKHNDKTRDSDSLTKEKIQETKVTSSVLVVNEVKLNIFSPSDSITSDTAAHELRASTIHDSRDEMTPSSSTRHKDWLDLSCWLPPEISSIYKEKGITKLHPWQVECLKVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKATHLDVLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEECRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAGEGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVANWLQAALYHTDFRPVPLEEYIKVGNTIYNKSLDIVRTISKTANLGGRDPDHIVELCNEVVEDGHSVLIFCSSRKGCESTAKHVSKFLKKFSVKIQNENSEFTDIFSAIDALRRCPSGLDPVLEETFPSGVAYHHAGLTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGARYRQMAGRAGRTGIDTKGESVLICRPEEVKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAADIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNGYTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMGLSSLDQSVGNRVGVTEPFLMRMAHGAPVRRANISRRTKRDEHVGVYGDRPSEEQTIRVCKRFYVALILSRLVQETPIPEVCDAFKVARGMVQALQESAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASDAELVKALSESASWTTEESTAQKRMHVGLARKIKHGARKVVLDKAEEARIAAFSAFKSLGFTVPQISHPLSASADRNITAQVAVSTQQMERVLTLSCVGGTSSSEKFVGKNPSETGAISIDVKQSDSGVNPPVNAEGSAIQDSNTVGECAGKVDVAISSHLERITDKDAQREQHSSKFLHLLKRDGSSMKGPIQAASTSGGFESFLNLWDASQEFYFDLYYTKRSEVNSVVPFELHGIAICWENSPVYYVNIPKDLLGPKSGKGLCPDDSISGDQVDVSQNEHWFEMIEMRWKKINEIFTKKNVRKFAWNLKVQVQVLKCPGVSIQKLGFLNSARRNMGLKLVDGSYLVLSRVHMSNVIDMCIVAWILWPDDERNSTLNLEKEVKKRLSGEAAAAANRNGQWKNQLRRVAHNVCCRRVAQTRALCSVLWKLIISEKLLDALNNIEIPLVGILADMETWGIGVDMEGCIRAPYRLAGMTFSLYAAADIANVLYGHLKLSIPEGFNKGKQHPSTDKHCLDLLRNEHPIVPVIKEHRTLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVEFKMNEDDVDHCKINARDFFISTQENWLLLSADYSQIELRLMAHFSKDSLLIELLSIPHGDVFTMIAARWTGKTEDSIGSHERDQTKRLVYGILYGMGAKSLSLQLECSRDEAVEKIQSFKSSFPGVASWLHEAVAFCRQKGYVETLKGRRRFLSKINSPISKEKSKAQRQAVNSICQGSAADIIKLAMIHVYSVIGTDFPDLTVLTAANSNILRGHCRIVLQVHDELVLEVDPSVVKEAASLLQKSMENAASLLVPLQVKLKVGRTWGSLETFLPDNFQIEALAPGS* | 2123 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 15368567 | 15383381 | + | Chy3G062100.1 | Chy03g01230 | 223391 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy03g01230 | 2122 | Pfam | Helix-turn-helix domain | 912 | 1002 | IPR046931 | - | |
| Chy03g01230 | 2122 | Gene3D | Taq DNA Polymerase; Chain T, domain 4 | 1705 | 1801 | - | - | |
| Chy03g01230 | 2122 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 756 | 948 | IPR001650 | - | |
| Chy03g01230 | 2122 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Chy03g01230 | 2122 | Pfam | DNA polymerase family A | 1714 | 2103 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
| Chy03g01230 | 2122 | CDD | SF2_C_Ski2 | 718 | 919 | - | - | |
| Chy03g01230 | 2122 | SMART | helicmild6 | 825 | 907 | IPR001650 | - | |
| Chy03g01230 | 2122 | Pfam | Helicase conserved C-terminal domain | 755 | 907 | IPR001650 | - | |
| Chy03g01230 | 2122 | Gene3D | - | 1871 | 2015 | - | - | |
| Chy03g01230 | 2122 | SUPERFAMILY | Sec63 N-terminal domain-like | 1104 | 1252 | - | - | |
| Chy03g01230 | 2122 | Gene3D | - | 729 | 928 | IPR027417 | - | |
| Chy03g01230 | 2122 | Pfam | DEAD/DEAH box helicase | 527 | 700 | IPR011545 | GO:0003676|GO:0005524 | |
| Chy03g01230 | 2122 | Gene3D | - | 1101 | 1231 | - | - | |
| Chy03g01230 | 2122 | MobiDBLite | consensus disorder prediction | 172 | 187 | - | - | |
| Chy03g01230 | 2122 | MobiDBLite | consensus disorder prediction | 172 | 212 | - | - | |
| Chy03g01230 | 2122 | Gene3D | - | 1439 | 1700 | IPR036397 | GO:0003676 | |
| Chy03g01230 | 2122 | Gene3D | - | 1815 | 2102 | - | - | |
| Chy03g01230 | 2122 | PANTHER | DNA POLYMERASE THETA | 515 | 2109 | - | - | |
| Chy03g01230 | 2122 | MobiDBLite | consensus disorder prediction | 198 | 212 | - | - | |
| Chy03g01230 | 2122 | CDD | DEXHc_POLQ-like | 498 | 719 | - | - | |
| Chy03g01230 | 2122 | SMART | polaultra3 | 1847 | 2070 | IPR001098 | GO:0003677|GO:0003887|GO:0006260 | |
| Chy03g01230 | 2122 | SMART | ultradead3 | 510 | 729 | IPR014001 | - | |
| Chy03g01230 | 2122 | Gene3D | - | 498 | 719 | IPR027417 | - | |
| Chy03g01230 | 2122 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 524 | 716 | IPR014001 | - | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 1976 | 1987 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 2008 | 2024 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 1917 | 1942 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 1954 | 1965 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 1862 | 1885 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | PRINTS | DNA-polymerase family A (pol I) signature | 1806 | 1828 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 527 | 921 | IPR027417 | - | |
| Chy03g01230 | 2122 | PANTHER | DNA POLYMERASE I | 515 | 2109 | IPR002298 | GO:0003887|GO:0006261 | |
| Chy03g01230 | 2122 | SUPERFAMILY | DNA/RNA polymerases | 1681 | 2105 | IPR043502 | - | |
| Chy03g01230 | 2122 | CDD | DNA_pol_A_theta | 1753 | 2105 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy03g01230 | K02349 | POLQ; DNA polymerase theta [EC:2.7.7.7] | - | csv:101215433 | 4070.77 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy03g01213 | Chy-Chr3:15245666 | Chy03g01230 | Chy-Chr3:15368567 | 9.78E-06 | dispersed | |
| Chy03g01230 | Chy-Chr3:15368567 | Chy06g00771 | Chy-Chr6:5356845 | 1.06E-21 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g343 | . | . | . | . | Bpe02g01197 | . | . | . | Cmo05g00632 | . | . | Cma05g00730 | . | . | . | . | . | Bhi04g00821 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone17ag1106 | . | . | . | . | Cme03g01725 | . | Blo18g00068 | . | . | . | . | Bma01g01331 | . | . | . | . | . | . | . | Car05g00549 | Cpe11g00651 | . | . | . | . | . | . | . | . | Cla08g01238 | Cam08g1696 | Cec08g1275 | Cco08g1396 | Clacu08g1393 | . | Cre08g1178 | Lsi08g01101 | . | Chy03g01230 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0007306 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 35 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chy03g01230 | Chy_Chr03 | FPKM | 82.466995 | 86.346115 | 24.384367 | 26.688164 | 24.795025 | 27.852167 | 25.252588 | 37.860592 | 34.445232 | 32.428402 |