Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01266 ATGTCCAGAATTATTCCACTGCCATTTCTCACAACCCTACTCCCTGTTTACCTCTTCTACTTCATCTACATACAATTCCATGCAAGTTCACTAACTGTCAATGTAGTCCAGGCCATCTTGCTTGATCTCAAAGAACAATGGGGGAATCCACCCTCTCTTGGGTTATGGAATGCCTCGTCCTTGTCCTGTGATTGGCCGGAGATCATCTGTAGAGATAGCACGGTCATTGGAATCTCTCTGAGGAACAAGAATATCACTGGGAAAGTCCCAACTGTCATATGTAAGCTGCAAAATCTCACTGTGCTTGATCTTTCATGGAACTATATCCCTGGTGAGTTCCCAGAAGTTTTATACAACTGTTCCAAGCTCAAATATCTTGATCTTTCAGGAAACTATTTTGTGGGTCCAATACCCCAAGATGTAGACCGGCTTCAAACTCTACAGTACATGGACCTTAGCGCCAACAACTTCTCAGGCGATTTTCCGGCTGCGCTAGGGCAGTTGTCAGATTTGAGAACTTTAAAAATTTACAGAACTCAATGCAATGGCACATTGCCAGCTGAAATTGGTAACTTGTCCAATCTTGAAATTTTGAGCATGGCGTATAACACTTTGCTTGTCCCATCGCCAATACCAGAAGATTTCAGGAAACTGAAGAAGTTGAAATATATGTGGATGACAAAGTCCAATTTGATAGGTGAAATCCCAGAAAGCTTATTGGAACTTTTAAGCCTTGAACACTTGGATTTATCCGGTAACAACTTGATAGGTTCTATTCCTGTTGGGTTCTTCTCTTTGCAGAATTTAACCAACTTATTTCTCTACCAAAACCAATTGTCCGGAGAAATACCCAAGTCGATTCGAGCATCAAATTTACTCAATGTTGACCTCTCTGCGAACAATTTAAGTGGCACGATCCCTGAAGATTTTGGGAAGTTAAAAAAGTTGCAGGTCTTGAACTTGTTTGCGAATCAGTTGTCTGGAGAGATTCCAGGAAGTCTAGGCCTCATACCTGAACTGAAAGGTTTTCGTGTATTCAACAACAGCCTAACTGGGGGCTTGCCCCAAGAATTGGGTCTGCACTCAAATCTGGAAGCATTGGAGGTTTCAATGAATAAACTAAGCGGTTCCTTACCTGAACATCTCTGTAAAAATGGCGTCTTACAGGGAGTAGTTGCTTTTTCCAACAATCTTAGTGGCAAATTGCCGAAAGGGCTTGGCAATTGTAGGACTTTACGAACAGTCCAGCTTTCTAACAACAATTTTTCTGGTGAAATTCCTCCAGGTCTTTGGACTACTTTCAATCTATCAAGCATAATGTTAGATGGAAATTCATTCTCAGGTGAGTTACCAGATAGCTTATCTTGGAATCTCTCGAGACTGGCAATAAATAACAACAAATTTTGGGGTCAAATTCCTCAAAATGTGTCAGCTTGGCGAAACTTGATTGTGTTTGAGGCAAGCGACAATCTGCTTTCTGGTAAGTTCCCTGATGGATTGACAAGTCTTCCTCGTCTTACCACACTTGTATTGAGTGGTAATCAACTCTCAGGCCAACTTCCAACAACAATTGGTTCGTGGGAATCATTGAATACTCTAAATCTCTCTAGAAATGAAATTTCAGGCCATATTCCTGCAGCATTTGGTTCTCTTCCTAACCTCCTATACCTGGATTTATCAGGTAATAACTTCACAGGTGAAATCCCACCTGAAATTGGCCACCTAAGACTGGCTTCCCTCAACTTGTCTTCCAATCAGCTTTCAGGGAAAATCCCAGATGAGTACGAGAATATAGCATATGAAAGGAGTTTCTTGAACAACGCCAAACTGTGTACCGCCATCAGTGTACTTGACCTTCCGAGCTGTTATTCTAGACAAATAGATTCAAAATATCAGTCCTTTAAATATCTTTCCCTCATTCTAGCTCTCACTGTTACCTTGCTCGTAATTGCTTTACTATGGATTATCATCCTATATAAAAGATATTGTAAAAAGGATGAAAGATACCACCCTGACACATGGAAGCTAACTTCATTCCAGAGATTGGAGTTCACAGAAACGAATATCTTGTCAAACTTGACAGAAACCAATCTGATCGGAAGTGGTGGATCCGGCAAAGTGTACTGCATAGACATCAACCATGCTGGTTATTATGTAGCTGTCAAAAGGATTTGGAGTAACAATAAGTTAGATAAAAAACTTGAGAAAGAATTTCAAGCAGAAGTTCAAATACTAGGCTCAATTCGGCATTCAAATATAGTGAAGCTGCTATGCTGCGTCTGGAATGAGAATTCAAAGCTTTTAGTCTATGAATACATGGAAAATCAGAGCCTAGATAGGTGGCTTCATAAAAAGAAGAAAAGGTTAACATCTGCGGCAGTGAATTTTCTTGAGCAATCTGTCTTAGACTGGCCGAGGAGGTGGCAGATTGCTATTGGAGCTGCACAGGGCCTCAGCTATATGCACCATGATTGCTCTCCACCAATCATTCATCGAGATGTGAAGTCGAGTAATATCTTATTAGACCGTGAGTTTCAGGCAAAGATAGCAGATTTTGGGTTGGCCAAGATGCTCGCCAGTCAGGGAGAGCCCCACACCATCTCTGCAATAGCAGGATCATTCGGCTACATAGCCCCAGAGTATGCCTACACAACGAAAGTAAATGAGAAGATTGATGTCTATAGCTTTGGGGTTGTACTCCTGGAGCTTACAACAGGAAGGGAACCTAACAGTGGAGATGAGCACACAAGCCTAGCAGAATGGGCATGGCAGCAATATAGTGAGGGAAAACCTATTATTGATTCCCTTGATGAGGAAATTAAAAACCCATGCAACTTCGAAGAGATGACTACTATGTTCAAACTTGGTCTAATTTGTACGAGCATGTTACCTGAAATACGACCTTCGATGAAAGAAGTTCTGCGTATTCTACGCCAATGCAGTCCTCCAGAAGCCTGTGATAGGAGAAAGCATGCCATTGAATTTGATGCTATTCCCTTCCTCGGCACTCCTCTATGA 3018 41.55 MSRIIPLPFLTTLLPVYLFYFIYIQFHASSLTVNVVQAILLDLKEQWGNPPSLGLWNASSLSCDWPEIICRDSTVIGISLRNKNITGKVPTVICKLQNLTVLDLSWNYIPGEFPEVLYNCSKLKYLDLSGNYFVGPIPQDVDRLQTLQYMDLSANNFSGDFPAALGQLSDLRTLKIYRTQCNGTLPAEIGNLSNLEILSMAYNTLLVPSPIPEDFRKLKKLKYMWMTKSNLIGEIPESLLELLSLEHLDLSGNNLIGSIPVGFFSLQNLTNLFLYQNQLSGEIPKSIRASNLLNVDLSANNLSGTIPEDFGKLKKLQVLNLFANQLSGEIPGSLGLIPELKGFRVFNNSLTGGLPQELGLHSNLEALEVSMNKLSGSLPEHLCKNGVLQGVVAFSNNLSGKLPKGLGNCRTLRTVQLSNNNFSGEIPPGLWTTFNLSSIMLDGNSFSGELPDSLSWNLSRLAINNNKFWGQIPQNVSAWRNLIVFEASDNLLSGKFPDGLTSLPRLTTLVLSGNQLSGQLPTTIGSWESLNTLNLSRNEISGHIPAAFGSLPNLLYLDLSGNNFTGEIPPEIGHLRLASLNLSSNQLSGKIPDEYENIAYERSFLNNAKLCTAISVLDLPSCYSRQIDSKYQSFKYLSLILALTVTLLVIALLWIIILYKRYCKKDERYHPDTWKLTSFQRLEFTETNILSNLTETNLIGSGGSGKVYCIDINHAGYYVAVKRIWSNNKLDKKLEKEFQAEVQILGSIRHSNIVKLLCCVWNENSKLLVYEYMENQSLDRWLHKKKKRLTSAAVNFLEQSVLDWPRRWQIAIGAAQGLSYMHHDCSPPIIHRDVKSSNILLDREFQAKIADFGLAKMLASQGEPHTISAIAGSFGYIAPEYAYTTKVNEKIDVYSFGVVLLELTTGREPNSGDEHTSLAEWAWQQYSEGKPIIDSLDEEIKNPCNFEEMTTMFKLGLICTSMLPEIRPSMKEVLRILRQCSPPEACDRRKHAIEFDAIPFLGTPL* 1006
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 15720967 15724406 + Chy3G062460.1 Chy03g01266 223427
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01266 1005 CDD STKc_IRAK 699 977 - -
Chy03g01266 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 829 841 IPR008271 GO:0004672|GO:0006468
Chy03g01266 1005 SMART LRR_typ_2 242 266 IPR003591 -
Chy03g01266 1005 SMART LRR_typ_2 192 217 IPR003591 -
Chy03g01266 1005 SMART LRR_typ_2 503 527 IPR003591 -
Chy03g01266 1005 SMART LRR_typ_2 551 575 IPR003591 -
Chy03g01266 1005 SMART LRR_typ_2 313 336 IPR003591 -
Chy03g01266 1005 SMART LRR_typ_2 96 120 IPR003591 -
Chy03g01266 1005 Pfam Leucine Rich Repeat 244 263 IPR001611 GO:0005515
Chy03g01266 1005 Gene3D Ribonuclease Inhibitor 358 631 IPR032675 -
Chy03g01266 1005 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 995 - -
Chy03g01266 1005 SMART serkin_6 693 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01266 1005 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Chy03g01266 1005 ProSiteProfiles Leucine-rich repeat profile. 244 266 IPR001611 GO:0005515
Chy03g01266 1005 ProSiteProfiles Protein kinase domain profile. 693 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01266 1005 Gene3D Ribonuclease Inhibitor 36 208 IPR032675 -
Chy03g01266 1005 Gene3D Transferase(Phosphotransferase) domain 1 773 996 - -
Chy03g01266 1005 Pfam Protein kinase domain 695 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01266 1005 SUPERFAMILY L domain-like 44 383 - -
Chy03g01266 1005 Gene3D Phosphorylase Kinase; domain 1 662 772 - -
Chy03g01266 1005 Gene3D Ribonuclease Inhibitor 209 356 IPR032675 -
Chy03g01266 1005 SUPERFAMILY Protein kinase-like (PK-like) 684 977 IPR011009 -
Chy03g01266 1005 ProSitePatterns Protein kinases ATP-binding region signature. 699 722 IPR017441 GO:0005524
Chy03g01266 1005 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 995 - -
Chy03g01266 1005 SUPERFAMILY RNI-like 290 624 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01161 Chy-Chr2:8312810 Chy03g01266 Chy-Chr3:15720967 1.42E-25 dispersed
Chy02g01162 Chy-Chr2:8320511 Chy03g01266 Chy-Chr3:15720967 0 dispersed
Chy03g01266 Chy-Chr3:15720967 Chy06g01584 Chy-Chr6:17955989 0 dispersed
Chy03g01266 Chy-Chr3:15720967 Chy12g00907 Chy-Chr12:14466675 0 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71142 PF00069 Pkinase 8.20E-47 CL0016 Chy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01266 K00924 - csv:101219431 1885.54