Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01280 ATGGTGATGCCGGAGTCGTCCGAAGGTCACCGTACGGCTTCTCGGCGAGCAAATCGACCGCCGATTCGACCGCTTGTAGGACCTAGGGTTCCACTGAGACGGTTACTAAGAGTCGCATCTATCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTTTCTCTTCTCACTCCTTATATTCAAGAGCTTGGTATTCCTCACGCTTGGTCTAGTCTTATATGGCTCTGTGGACCGATTTCTGGTCTCTTTGTTCAACCGCTCGTTGGTCATATGAGCGATCACTGCACCAGCCGATACGGTCGTCGGAGGCCGTTCATCGTCGCTGGAGCGCTTTCTATAGTACTCGCTGTTTTGGTTATTGGTCACTCTGCAGACCTCGGTTGGTGGATTGGTGACAGAGGTGATGTTAGGCCTCGTGCGATTGTATTCTTTGTGGTTGGCTTTTGGATTCTCGATGTAGCTAACAACGTCTCCCAAGGTCCTTGTAGAGCTCTGCTTGCTGATCTTACCGGAAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCTCTATTTATTGCTGTTGGTAATATTTTTGGATATGCAACTGGATCTGTTAGTGGCTTGTACAAGATCTTCCCATTTACTCTCACCTCTGCATGTTCTGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATATCGTGTTCATTGCAATTACAACATATTTGAGTGTATCGGCAGCTCAAGAAATACCTCTAGTTTCAAACGACAGGTCCTCCCTGGTTTTAGAAGAAAGTATGGGGGAGTCAGGTCATGCTTCAGAAGCATTTTTCTGGGACTTGTTTCACACTTTTAGACACTTCTCTGGTTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGGTAGCATGGTTTCCATTTATTCTCTTTGATACTGATTGGATGGGTAGAGAGATTTATGGTGGCAAGCCAAATGAAGGACAGACTTATAGTTCGGGAGTCAGAATGGGAGCATTTGGTCTGTTGTGTAACTCTGTTGTCCTCGGAATAACTTCACTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTCATATGGGGAATCTCTAATATTTTTATGGGTATATGTTTTCTTACTATCCTGGTTGTTACGTATGTGGCAAACAATATGGGCTATACAGGTCACGATCTCCCACCAAATAGTATTGTATCAGCTGCATTGATTATCTTTGCCCTTCTTGGCGCCCCTTTGGCAATTACTTACAGTGTTCCATATGCCATGATTTCCTCACGCGCTGAATCTTTACAACTTGGTCAAGGTGAGATTCATGTTGTTTTCTTCAAATGGAAGAATAGAGGGCTGCTTATTGTGGAGTTGCTTCTTGCAGGTTTGTCTGCGGGTGTCTTGAACTTAGCAATAGTTTTCCCACAGGTTGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCTTTTGCTGTGGCAGCACTTGCAGCCTTTGCAAGTGGACTCATTGCCATCTTGGCTCTTCCTCGGTCTGGTGCTCAGAACCCCAGGAACCTCACATGA 1593 45.45 MVMPESSEGHRTASRRANRPPIRPLVGPRVPLRRLLRVASIACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPISGLFVQPLVGHMSDHCTSRYGRRRPFIVAGALSIVLAVLVIGHSADLGWWIGDRGDVRPRAIVFFVVGFWILDVANNVSQGPCRALLADLTGKDHRRNRVANAYFSLFIAVGNIFGYATGSVSGLYKIFPFTLTSACSVNCANLKSAFLIDIVFIAITTYLSVSAAQEIPLVSNDRSSLVLEESMGESGHASEAFFWDLFHTFRHFSGYIWVILLVTSLTWVAWFPFILFDTDWMGREIYGGKPNEGQTYSSGVRMGAFGLLCNSVVLGITSLLMEKLCRKWGAGFIWGISNIFMGICFLTILVVTYVANNMGYTGHDLPPNSIVSAALIIFALLGAPLAITYSVPYAMISSRAESLQLGQGEIHVVFFKWKNRGLLIVELLLAGLSAGVLNLAIVFPQVVVSLGSGPWDQLFGGGNSPAFAVAALAAFASGLIAILALPRSGAQNPRNLT* 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15820581 15826004 + Chy3G062600.1 Chy03g01280 223441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01280 530 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 463 528 - -
Chy03g01280 530 MobiDBLite consensus disorder prediction 1 22 - -
Chy03g01280 530 CDD MFS_SLC45_SUC 35 516 - -
Chy03g01280 530 PANTHER SUGAR TRANSPORTER 463 528 - -
Chy03g01280 530 Gene3D MFS general substrate transporter like domains 32 517 IPR036259 -
Chy03g01280 530 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 11 442 - -
Chy03g01280 530 PANTHER SUGAR TRANSPORTER 11 442 - -
Chy03g01280 530 Pfam MFS/sugar transport protein 48 236 - -
Chy03g01280 530 SUPERFAMILY MFS general substrate transporter 33 521 IPR036259 -
Chy03g01280 530 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 441 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01280 Chy-Chr3:15820581 Chy05g00670 Chy-Chr5:8534420 3.26E-154 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01280 K15378 - csv:101220384 955.666