Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01292 ATGGCCGCCGCCGTGCCGGAAAATCTGTCTCGCGAGCAATACGTGTACCTAGCGAAGCTTGCTGAGCAGGCGGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACACCTGGCTCAGAGCTATCTGTTGAGGAGCGAAATCTTCTCTCTGTGGCTTACAAGAACGTGATTGGCTCACTTCGAGCTGCTTGGCGGATTGTTTCTTCCATCGAGCAAAAGGAGGAAAGTCGTAAGAATGAAGAGCATGTTGTGCTTGTTAAAGATTATAGATCAAAGGTTGAGTCTGAGCTTTCCGATGTCTGCGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCATCTGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGAGATGAGAGGAAAGCTGCTGCTGAGGATACTATGCTGGCTTATAGGGCTGCTCAGGATGTCGCAGTTGCGGATCTTGCTCCCACTCATCCGATAAGGCTGGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGAAGTTGATTGGATCTGTGACTGAATGTGAATCATTGATCCATCTCCCTTTGCAAGAATTCAATCATAGATTGAAACTGCTCGCTGACGTTGTTACAAGAAGTATGCTTTCCCCATCTTTCTTTCGTGTGTTACTCATCAGTCCATACTCCTCTGATCAGGCATTTGAGGAAGCCATTGCTGAGCTGGACACTCTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCGCAGGACCAGTTAGATGAGTCATAG 918 46.51 MAAAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVESELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEKLIGSVTECESLIHLPLQEFNHRLKLLADVVTRSMLSPSFFRVLLISPYSSDQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES* 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 15935736 15938925 - Chy3G062720.1 Chy03g01292 223453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01292 305 PANTHER 14-3-3 PROTEIN 259 301 IPR000308 -
Chy03g01292 305 PANTHER 14-3-3 PROTEIN 8 238 IPR000308 -
Chy03g01292 305 ProSitePatterns 14-3-3 proteins signature 2. 277 296 IPR023409 -
Chy03g01292 305 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Chy03g01292 305 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Chy03g01292 305 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Chy03g01292 305 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Chy03g01292 305 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Chy03g01292 305 Coils Coil 17 37 - -
Chy03g01292 305 Pfam 14-3-3 protein 259 295 IPR023410 -
Chy03g01292 305 Pfam 14-3-3 protein 17 236 IPR023410 -
Chy03g01292 305 PANTHER BNAC02G00320D PROTEIN 259 301 - -
Chy03g01292 305 PANTHER BNAC02G00320D PROTEIN 8 238 - -
Chy03g01292 305 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Chy03g01292 305 SMART 1433_4 11 304 IPR023410 -
Chy03g01292 305 Gene3D - 1 305 IPR036815 -
Chy03g01292 305 SUPERFAMILY 14-3-3 protein 10 209 IPR036815 -
Chy03g01292 305 SUPERFAMILY 14-3-3 protein 259 300 IPR036815 -
Chy03g01292 305 PIRSF 14-3-3 257 305 IPR000308 -
Chy03g01292 305 PIRSF 14-3-3 6 242 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01292 Chy-Chr3:15935736 Chy04g00220 Chy-Chr4:1986377 1.11E-134 dispersed
Chy11g00784 Chy-Chr11:11071151 Chy03g01292 Chy-Chr3:15935736 2.12E-06 dispersed
Chy03g01292 Chy-Chr3:15935736 Chy04g00245 Chy-Chr4:2195752 4.76E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01292 K06630 - csv:101222827 459.914