Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01303 ATGTTATCCAAATTCCATCTCTCCCCCCACCCTTTTACCCACCATCCTCCGCCGCAACCTCCCGCGGATGAGCCTATCGCCGCCCTGCCTTCCCCTTTTAAACACCACACGGACCTCACCTCCACCGCCGATGGTTCCACCATCGAGGTGGTCCGACGGCCCAGGGGTCGCCCACCGGGTTCTAAAAATAAACCCAAACCGCCTCTTGTTGTAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTACCTGGTGGAAACGACGTCGTTGAAGCTATTTCGAGATTTTCCCGTCGCAAAAATTTGGGACTTTGTGTTCTAAACGGATCCGGTACCGTTGCTAATGTCTCTCTCCGTCAACCCTCCGCCACTCCTGGCGCTACCGTTACTTTTCACGGCCGTTTTGAGATTCTCTCCATTTCCGCTACCGTTTTCCCTCAATCAACGCCGTTACCGTTACCTAATGGTTTTTCCATCTCCCTTGCCGGGCCTCAGGGTCAAATCGTCGGCGGTTTGGTTGCTGGCGCGTTAATTGCCGCCGGTACCGTTTTTGTCGTCGCCTCGTCCTTTAATAATCCCTTTTACCATCGGCTTCCTGATGAGGAAGAGATTAAGAATTTGGGATCCGGTGGCGGCAGTGGCGGTGGAGAAGTCCACTCCCCACACGTCTCCGGCGGCGGAGATAGTAGCGGGCAGGGACATGGGCACGGGCAGATTGCGGAAACGTGTGGAATGGCTATGTATAGTTGCCACGCGCCGTCCGATGTAATTTGGGCGCCGACGGCGAGGCAACCACCCCCGCCGTACTGA 819 56.29 MLSKFHLSPHPFTHHPPPQPPADEPIAALPSPFKHHTDLTSTADGSTIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLGLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPLPNGFSISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPFYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGQGHGHGQIAETCGMAMYSCHAPSDVIWAPTARQPPPPY* 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16017193 16018011 - Chy3G062830.1 Chy03g01303 223464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01303 272 MobiDBLite consensus disorder prediction 1 72 - -
Chy03g01303 272 Gene3D - 79 211 - -
Chy03g01303 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 205 - -
Chy03g01303 272 ProSiteProfiles PPC domain profile profile. 76 214 IPR005175 -
Chy03g01303 272 CDD DUF296 80 193 IPR005175 -
Chy03g01303 272 MobiDBLite consensus disorder prediction 11 27 - -
Chy03g01303 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 38 271 - -
Chy03g01303 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 271 IPR014476 GO:0003680
Chy03g01303 272 MobiDBLite consensus disorder prediction 208 241 - -
Chy03g01303 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 195 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01303 Chy-Chr3:16017193 Chy06g00280 Chy-Chr6:1884621 1.60E-51 dispersed
Chy02g01527 Chy-Chr2:13174959 Chy03g01303 Chy-Chr3:16017193 3.50E-48 transposed
Chy03g01303 Chy-Chr3:16017193 Chy04g00211 Chy-Chr4:1926956 4.45E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01303 - - csv:101203998 471.085